RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 CASTOR2A6NHX0 329 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 CYP3A5P20815 502 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF132P52740 706 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 RABGGTBP53611 331 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 C1QTNF8P60827 252 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 PAK2Q13177 524 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 LLGL1Q15334 1064 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 MS4A14Q96JA4 679 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 NAPGQ99747 312 aaPredicted RBP12.51□□□□□ -0.41
SSRP1-201ENST00000278412 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 L2HGDHQ9H9P8 463 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 CNTN3Q9P232 1028 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 TIMM13Q9Y5L4 95 aaPredicted RBP12.51□□□□□ -0.41
SSRP1-201ENST00000278412 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 CTAGE9A4FU28 777 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 MOXD2PA6NHM9 499 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 FGFR1P11362 822 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 CD19P15391 556 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 LMO2P25791 158 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 GATMP50440 423 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 LBX1P52954 281 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
SSRP1-201ENST00000278412 RAD23BP54727 409 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 ENPEPQ07075 957 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 PTK7Q13308 1070 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 C9orf57Q5W0N0 161 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 C11orf70Q9BRQ4 267 aa12.51□□□□□ -0.41
SSRP1-201ENST00000278412 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
SSRP1-201ENST00000278412 UNC80Q8N2C7 3258 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 SZT2Q5T011 3432 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 ARL5CA6NH57 179 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 KBTBD13C9JR72 458 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 ARVCFO00192 962 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 BUB1BO60566 1050 aaPredicted RBP12.5□□□□□ -0.41
SSRP1-201ENST00000278412 NBNO60934 754 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 CCL23P55773 120 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 DENND1BQ6P3S1 775 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 C1orf131Q8NDD1 294 aaKnown RBP12.5□□□□□ -0.41
SSRP1-201ENST00000278412 BCO2Q9BYV7 579 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 FAM49BQ9NUQ9 324 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 PHF24Q9UPV7 400 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 C2CD2Q9Y426 696 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 TULP2O00295 520 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 PDGFRBP09619 1106 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 UNGP13051 313 aaPredicted RBP12.5□□□□□ -0.41
SSRP1-201ENST00000278412 RRM1P23921 792 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 MARCKSL1P49006 195 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 NDST1P52848 882 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 CDC42EP1Q00587 391 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 SURF1Q15526 300 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 SLC4A11Q8NBS3 891 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 RALGAPA2Q2PPJ7 1873 aa12.5□□□□□ -0.41
SSRP1-201ENST00000278412 ITGB1P05556 798 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSRP1-201ENST00000278412 CLCNKBP51801 687 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 SOWAHAQ2M3V2 549 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 CYP4A22Q5TCH4 519 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 AADACL2Q6P093 401 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 MMS22LQ6ZRQ5 1243 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 TMCO2Q7Z6W1 182 aaPredicted RBP12.49□□□□□ -0.41
SSRP1-201ENST00000278412 LRRC57Q8N9N7 239 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 TPCN2Q8NHX9 752 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 UBA3Q8TBC4 463 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ISCUQ9H1K1 167 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 PLEKHA4Q9H4M7 779 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 CNTN6Q9UQ52 1028 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 O00370 1275 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ATP2C2O75185 946 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ACAT1P24752 427 aaKnown RBP12.49□□□□□ -0.41
SSRP1-201ENST00000278412 CDK7P50613 346 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 AP3M2P53677 418 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 RBP5P82980 135 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ACOT1Q86TX2 421 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF710Q8N1W2 664 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ZBTB9Q96C00 473 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 ZNF653Q96CK0 615 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 NOX5Q96PH1 765 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 C5orf42Q9H799 3197 aa12.49□□□□□ -0.41
SSRP1-201ENST00000278412 EYSQ5T1H1 3165 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
SSRP1-201ENST00000278412 TBXAS1P24557 533 aaPredicted RBP12.48□□□□□ -0.41
SSRP1-201ENST00000278412 NOMO3P69849 1222 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 CBX1P83916 185 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 DSC3Q14574 896 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 PPP1R10Q96QC0 940 aaKnown RBP12.48□□□□□ -0.41
SSRP1-201ENST00000278412 ITGA11Q9UKX5 1188 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 CILPO75339 1184 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 ITGA4P13612 1032 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 AXLP30530 894 aa12.48□□□□□ -0.41
SSRP1-201ENST00000278412 CYP2C18P33260 490 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms