RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 CLTAP09496 248 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 PLA2G4BP0C869 781 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 CYP3A5P20815 502 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
VPS50-201ENST00000251739 MCM4P33991 863 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 RPS9P46781 194 aaKnown RBP11.24□□□□□ -0.61
VPS50-201ENST00000251739 ZNF131P52739 623 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 SMTNP53814 917 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 CTXN3Q4LDR2 81 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 FAM78AQ5JUQ0 283 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 ERMP1Q7Z2K6 904 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 APPL2Q8NEU8 664 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 TMX3Q96JJ7 454 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 ASB16Q96NS5 453 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 CORO1BQ9BR76 489 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 LRRC3Q9BY71 257 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 BCO2Q9BYV7 579 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 TRPV4Q9HBA0 871 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 CYP4F11Q9HBI6 524 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 PRMT8Q9NR22 394 aaPredicted RBP11.24□□□□□ -0.61
VPS50-201ENST00000251739 KCNG1Q9UIX4 513 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 KIF3AQ9Y496 699 aa11.24□□□□□ -0.61
VPS50-201ENST00000251739 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.24□□□□□ -0.61
VPS50-201ENST00000251739 NPHP3-ACAD11A0A0J9YXS1 232 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 VWA3AA6NCI4 1184 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 FAM170BA6NMN3 283 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 CLDN3O15551 220 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 CD46P15529 392 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 CD72P21854 359 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 ELF1P32519 619 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 TNFSF9P41273 254 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 ID4P47928 161 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 ADCY1Q08828 1119 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 STRN3Q13033 797 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 UBXN2BQ14CS0 331 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 ZBTB41Q5SVQ8 909 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 SLC39A4Q6P5W5 647 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 TPRG1Q6ZUI0 275 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 HAUS6Q7Z4H7 955 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 LEMD2Q8NC56 503 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 ZBTB44Q8NCP5 570 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 AK8Q96MA6 479 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 REEP2Q9BRK0 252 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 TRPV5Q9NQA5 729 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 HEBP1Q9NRV9 189 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 BLOC1S4Q9NUP1 217 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 LARSQ9P2J5 1176 aaKnown RBP11.23□□□□□ -0.61
VPS50-201ENST00000251739 YIPF1Q9Y548 306 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 PCDHGA2Q9Y5H1 932 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 SPAG17Q6Q759 2223 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 CHD8Q9HCK8 2581 aa11.23□□□□□ -0.61
VPS50-201ENST00000251739 CNOT1A5YKK6 2376 aaKnown RBP11.22□□□□□ -0.61
VPS50-201ENST00000251739 H0YCG3 227 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 ARNTLO00327 626 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 ZNF197O14709 1029 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 SPTLC1O15269 473 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 LILRB5O75023 590 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 TDGF1P13385 188 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 SCP2P22307 547 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 GJB2P29033 226 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 ARPP19P56211 112 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 ZRSR1Q15695 479 aaKnown RBP11.22□□□□□ -0.61
VPS50-201ENST00000251739 ENOX2Q16206 610 aaKnown RBP11.22□□□□□ -0.61
VPS50-201ENST00000251739 MCTP1Q6DN14 999 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 VITQ6UXI7 678 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 RNF19BQ6ZMZ0 732 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 PDZD4Q76G19 769 aaPredicted RBP11.22□□□□□ -0.61
VPS50-201ENST00000251739 TMC8Q8IU68 726 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 SHKBP1Q8TBC3 707 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 RUBCNQ92622 972 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 SMARCD2Q92925 531 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 BORCS6Q96GS4 357 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 ZSWIM3Q96MP5 696 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 NELL2Q99435 816 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 PLIN2Q99541 437 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 OXCT2Q9BYC2 517 aaPredicted RBP11.22□□□□□ -0.61
VPS50-201ENST00000251739 DNAJC25Q9H1X3 360 aa11.22□□□□□ -0.61
VPS50-201ENST00000251739 UBQLN1Q9UMX0 589 aaKnown RBP11.22□□□□□ -0.61
VPS50-201ENST00000251739 A0A0B4J269 797 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 LACTBL1A8MY62 500 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 PPEF2O14830 753 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 HNRNPDLO14979 420 aaKnown RBP11.21□□□□□ -0.61
VPS50-201ENST00000251739 OGTO15294 1046 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 LAMTOR5O43504 91 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 CPB1P15086 417 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 TYMPP19971 482 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 YWHAHQ04917 246 aaPredicted RBP11.21□□□□□ -0.61
VPS50-201ENST00000251739 PPP2R3AQ06190 1150 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 SPAG1Q07617 926 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 TWF1Q12792 350 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 GPR17Q13304 367 aa11.21□□□□□ -0.61
VPS50-201ENST00000251739 GRM2Q14416 872 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms