RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SETD3Q86TU7 594 aaPredicted RBP10.92□□□□□ -0.66
VCL-201ENST00000211998 MCRS1Q96EZ8 462 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 SENP7Q9BQF6 1050 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 BTBD10Q9BSF8 475 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 DDX56Q9NY93 547 aaKnown RBP10.92□□□□□ -0.66
VCL-201ENST00000211998 SLC9A2Q9UBY0 812 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 CDYLQ9Y232 598 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
VCL-201ENST00000211998 OVOS2A0A0G2JMS6 1433 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 OVOS2Q6IE36 1432 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 COL15A1P39059 1388 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 NEDD4P46934 1319 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 RGS5O15539 181 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 RHOBTB1O94844 696 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 CALB1P05937 261 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 MTMR1Q13613 665 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 LAYNQ6UX15 382 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 TMEM79Q9BSE2 394 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 FOXP3Q9BZS1 431 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 GRIP2Q9C0E4 1043 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 TMEM245Q9H330 911 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 MRGBPQ9NV56 204 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 ZNF212Q9UDV6 495 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 CAPN6Q9Y6Q1 641 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 P4HA2O15460 535 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 SNX2O60749 519 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 AKR1B1P15121 316 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 PEX5P50542 639 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 ATP2C1P98194 919 aaPredicted RBP10.92□□□□□ -0.66
VCL-201ENST00000211998 RASA2Q15283 850 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 CCDC149Q6ZUS6 474 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 CATSPER4Q7RTX7 472 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 PCYOX1LQ8NBM8 494 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 TMEM35BQ8NCS4 154 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 AENQ8WTP8 325 aaKnown RBP10.92□□□□□ -0.66
VCL-201ENST00000211998 JADE3Q92613 823 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
VCL-201ENST00000211998 TMEM120AQ9BXJ8 343 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 FDX1P10109 184 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 SFNP31947 248 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 PHKA2P46019 1235 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 ITGADQ13349 1161 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 NAALADL2Q58DX5 795 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 EEPD1Q7L9B9 569 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 THEM5Q8N1Q8 247 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 HPS3Q969F9 1004 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 LRRC39Q96DD0 335 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 KLHL11Q9NVR0 708 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 SLC13A4Q9UKG4 626 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 ABCC3O15438 1527 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 UTYO14607 1347 aa10.92□□□□□ -0.66
VCL-201ENST00000211998 PDS5AQ29RF7 1337 aaKnown RBP10.92□□□□□ -0.66
VCL-201ENST00000211998 PLEKP08567 350 aaPredicted RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 VIL1P09327 827 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 COILP38432 576 aaPredicted RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 PEX3P56589 373 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ZNF394Q53GI3 561 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ARMC3Q5W041 872 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 PCNX4Q63HM2 1172 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 C1orf228Q6PIY5 440 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 RBM43Q6ZSC3 357 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 NLRP4Q96MN2 994 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 FAM111AQ96PZ2 611 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 LY9Q9HBG7 655 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ASNSD1Q9NWL6 643 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 V9GYQ6 96 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TMEM191CA6NGB0 347 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 H0YC42 278 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TBC1D12O60347 775 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 GEMIN4P57678 1058 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 ABCE1P61221 599 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 OSTNP61366 133 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TSGA10IPQ3SY00 556 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ASZ1Q8WWH4 475 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 USP17L5A8MUK1 530 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ZBTB39O15060 712 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 SNRPAP09012 282 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 SLC1A1P43005 524 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ARPP19P56211 112 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TTMPQ5BVD1 217 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TMEM270Q6UE05 265 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 FRA10AC1Q70Z53 315 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 EGFL6Q8IUX8 553 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 OR8H2Q8N162 312 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 C2orf69Q8N8R5 385 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 FAM118BQ9BPY3 351 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ABCF3Q9NUQ8 709 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ZC3H7BQ9UGR2 993 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 XPO7Q9UIA9 1087 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 MYO1GB0I1T2 1018 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 IL12RB1P42701 662 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 HERVK_113P62684 666 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 ALX1Q15699 326 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 IMPG1Q17R60 797 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 BRINP3Q76B58 766 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 TTC39CQ8N584 583 aa10.91□□□□□ -0.66
VCL-201ENST00000211998 NSUN6Q8TEA1 469 aaKnown RBP10.91□□□□□ -0.66
VCL-201ENST00000211998 C17orf50Q8WW18 174 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms