RNA–Protein interactions for RNA: ENSMUST00000106791.7

Trim3-203, Transcript of Tripartite motif-containing protein 3, mousemouse

TSL 1 (best) BASIC

Gene Trim3, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-203ENSMUST00000106791 Spred2Q924S7 410 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 Atp1a4Q9WV27 1032 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 Gm13276A0A087WR18 182 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 Art2aP17981 287 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 PfkmP47857 780 aaKnown RBP21.3■■□□□ 1
Trim3-203ENSMUST00000106791 B3gat3P58158 335 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 Tmprss15P97435 1069 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 Fam92bQ3V2J0 292 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 Csnk1g3Q8C4X2 424 aa21.3■■□□□ 1
Trim3-203ENSMUST00000106791 Becn1O88597 448 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Rad23aP54726 363 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Krt86P97861 486 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 HmmrQ00547 794 aaKnown RBP21.29■■□□□ 1
Trim3-203ENSMUST00000106791 DmwdQ08274 665 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Smcr8Q3UMB5 935 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Lrch2Q3UMG5 773 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Sema4bQ62179 823 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Hook3Q8BUK6 718 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Il33Q8BVZ5 266 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Lrrc45Q8CIM1 670 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Colgalt1Q8K297 617 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 PkmP52480 531 aaKnown RBP21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Col6a1Q04857 1025 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Q6PD19 689 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Pum3Q8BKS9 647 aaKnown RBP21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Cd209bQ8CJ91 325 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Pnma3Q8JZW8 466 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 DutQ8VCG1 200 aaKnown RBP21.29■■□□□ 1
Trim3-203ENSMUST00000106791 Adgrf5G5E8Q8 1348 aa21.29■■□□□ 1
Trim3-203ENSMUST00000106791 PrphP15331 475 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Xrcc5P27641 732 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Mgat1P27808 447 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Polr2fP61219 127 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Gjb6P70689 261 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Pak2Q8CIN4 524 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Gpr37l1Q99JG2 481 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Ddx50Q99MJ9 734 aaKnown RBP21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Luc7lQ9CYI4 371 aaKnown RBP21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Gtf2ird1Q9JI57 1104 aaKnown RBP21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Gm28036V9GXJ1 658 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Ube3aO08759 870 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Rdh7O88451 316 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 NcanP55066 1268 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Gbp1Q01514 589 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Pacsin1Q61644 441 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Crtc1Q68ED7 630 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Tas2r125Q7M710 311 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Pan2Q8BGF7 1200 aaKnown RBP21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Brat1Q8C3R1 822 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Cwh43Q91YL7 699 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Dnajb4Q9D832 337 aa21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Nup50Q9JIH2 466 aaKnown RBP21.28■■□□□ 1
Trim3-203ENSMUST00000106791 Zscan4-ps1A0A1C7CYV3 506 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Gm4297D3YWB7 211 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Ccdc121E9Q6D3 323 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Tekt4Q149S1 447 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Nlrc4Q3UP24 1024 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Cct8l1Q80YT3 562 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Znf473Q8BI67 892 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Cables1Q9ESJ1 568 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Fgf22Q9ESS2 162 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Rpf2Q9JJ80 306 aaKnown RBP21.27■■□□□ 1
Trim3-203ENSMUST00000106791 Znf394Q9Z1D9 521 aa21.27■■□□□ 1
Trim3-203ENSMUST00000106791 1700031M16RikA0A087WSH0 82 aa21.27■□□□□ 0.99
Trim3-203ENSMUST00000106791 Dennd5bA2RSQ0 1274 aa21.27■□□□□ 0.99
Trim3-203ENSMUST00000106791 XntrpcF8VQM8 1264 aa21.27■□□□□ 0.99
Trim3-203ENSMUST00000106791 4933406M09RikG3XA12 479 aa21.27■□□□□ 0.99
Trim3-203ENSMUST00000106791 Slc10a3P21129 473 aa21.27■□□□□ 0.99
Trim3-203ENSMUST00000106791 Timd2Q8R183 305 aa21.27■□□□□ 0.99
Trim3-203ENSMUST00000106791 Rab13Q9DD03 202 aa21.27■□□□□ 0.99
Trim3-203ENSMUST00000106791 Top6blJ3QMY9 579 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Bbof1Q3V079 533 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 SpdyaQ5IBH7 310 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Mapk6Q61532 720 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Fam163bQ8BUM6 167 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Rsl1d1Q8BVY0 452 aaKnown RBP21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Eif2b5Q8CHW4 717 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Frat2Q8K025 231 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Mms19Q9D071 1031 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Spatc1lQ9D9W0 342 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Veph1A1A535 833 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Xirp1O70373 1129 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 P01650 108 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 P01653 108 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Pax3P24610 479 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Ugt1a2P70691 533 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Smyd1P97443 490 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Ugt1a9Q62452 528 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Ugt1a1Q63886 535 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Pdcl2Q78Y63 240 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Lig4Q8BTF7 911 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Slc13a3Q91Y63 600 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Htra3Q9D236 459 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Homer2Q9QWW1 354 aa21.26■□□□□ 0.99
Trim3-203ENSMUST00000106791 Tnfaip1O70479 316 aa21.25■□□□□ 0.99
Trim3-203ENSMUST00000106791 Lmo2P25801 158 aa21.25■□□□□ 0.99
Trim3-203ENSMUST00000106791 Brcc3P46737 291 aa21.25■□□□□ 0.99
Trim3-203ENSMUST00000106791 Wdr5P61965 334 aa21.25■□□□□ 0.99
Trim3-203ENSMUST00000106791 Cyfip2Q5SQX6 1253 aa21.25■□□□□ 0.99
Trim3-203ENSMUST00000106791 Dnajc16Q80TN4 772 aa21.25■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms