RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Skint6A7XUZ6 1240 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Cyp11b2P15539 500 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Pla2g4aP47713 748 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Mcm4P49717 862 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Rnf10Q3UIW5 804 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Eif2b4Q61749 524 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Cspg5Q71M36 566 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Rpf1Q7TND5 349 aaKnown RBP11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 OgtQ8CGY8 1046 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Pde6cQ91ZQ1 861 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Trim59Q922Y2 403 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 PinlypQ9CQD7 212 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 1700016D06RikQ9DAA5 166 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 Myl7Q9QVP4 175 aa11.78□□□□□ -0.52
Ccdc60-202ENSMUST00000086483 PfklP12382 780 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cr2P19070 1025 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Csrp1P97315 193 aaKnown RBP11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Mrpl10Q3TBW2 262 aaKnown RBP11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 MslnQ61468 625 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Arl5cQ6P068 179 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Vat1lQ80TB8 417 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Ankfy1Q810B6 1169 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Apol10aQ8CCA5 318 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Kctd2Q8CEZ0 266 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Unc45bQ8CGY6 931 aaKnown RBP11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Mill2Q8HWE5 355 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Taf12Q8VE65 161 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Asb7Q91ZU0 318 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Slc26a4Q9R155 780 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Hebp1Q9R257 190 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Gm10093D3YYI8 482 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Hdac1O09106 482 aaKnown RBP11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Srsf5O35326 269 aaKnown RBP11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Enpp1P06802 906 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 C4bpaP08607 469 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Scarf2P59222 833 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cplx1P63040 134 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Rab33aP97950 237 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cacna2d4Q5RJF7 1116 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Pced1aQ6P1Z5 449 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Polr2eQ80UW8 210 aaKnown RBP11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Wscd1Q80XH4 572 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cdh7Q8BM92 785 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cpxm2Q9D2L5 764 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 LlphQ9D945 130 aaKnown RBP11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Akip1Q9JJR5 212 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Olig1Q9JKN5 260 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Krt85Q9Z2T6 507 aa11.77□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Gm43738A0A0G2JEA5 862 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 U2af2P26369 475 aaKnown RBP11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cdh15P33146 784 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Serpina1eQ00898 413 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Ndst1Q3UHN9 882 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Fgd5Q80UZ0 1219 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Wdr35Q8BND3 1181 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Fam3cQ91VU0 227 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Mmtag2Q99LX5 260 aaKnown RBP11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Rhobtb1Q9DAK3 695 aa11.76□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Sycp2lA0A0M3U1B0 842 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 DohhA0A1Y7VJ29 135 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Taf4bG5E8Z2 855 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Terf2O35144 541 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 CtssO70370 340 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Chrm1P12657 460 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Utp18Q5SSI6 552 aaKnown RBP11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Usp49Q6P9L4 685 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Adam29Q811Q4 763 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cstf2Q8BIQ5 580 aaKnown RBP11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Tmem87aQ8BXN9 555 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Pde2aQ922S4 916 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Erap1Q9EQH2 930 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Elf2Q9JHC9 593 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Large1Q9Z1M7 756 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Ncor2Q9WU42 2472 aaKnown RBP11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Ankrd11E9Q4F7 2643 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 ZxdbA2CE44 873 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Zscan25B2RX31 543 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 9330159F19RikD3Z623 648 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Colca2F8VPY8 239 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Opn1mwO35599 359 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Aoc3O70423 765 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 AlbP07724 608 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Hoxb4P10284 250 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 RhoP15409 348 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Sox18P43680 377 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Ndufs6P52503 116 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Irf7P70434 457 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Smyd5Q3TYX3 416 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Serac1Q3U213 654 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Gpr174Q3U507 335 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Ccna1Q61456 421 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Cyp3a11Q64459 504 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Tas2r125Q7M710 311 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Edem2Q8BJT9 577 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Mrps27Q8BK72 415 aaKnown RBP11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Pkn2Q8BWW9 983 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Q8CC96 669 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Lgi4Q8K1S1 537 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Pcolce2Q8R4W6 414 aa11.75□□□□□ -0.53
Ccdc60-202ENSMUST00000086483 Hnrnpul1Q8VDM6 859 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms