RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Tex11Q14AT2 947 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Faf2Q3TDN2 445 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Krt35Q497I4 455 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Stip1Q60864 543 aaKnown RBP9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Npdc1Q64322 332 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Dact1Q8R4A3 778 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 B020011L13RikA0A087WQI7 412 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Gbp11A9YVJ5 442 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Efna5O08543 228 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 S100a9P31725 113 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Samd11Q1RNF8 542 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Klra5Q60652 266 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Slc6a15Q8BG16 729 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Efl1Q8C0D5 1127 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Dpp3Q99KK7 738 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Nphs1Q9QZS7 1256 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Gm13023A2A8N2 498 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Sat1P48026 171 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Ptgs2Q05769 604 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Tigd5Q499M4 642 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Znf618Q80YY7 953 aaKnown RBP9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Wdr35Q8BND3 1181 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Nemp2Q8CB65 421 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Snx10Q9CWT3 201 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Bcs1lQ9CZP5 418 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Clca1Q9D7Z6 913 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Zfp626A0A0U1RQ84 676 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Fgf15O35622 218 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Myo19Q5SV80 963 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Ece2Q80Z60 881 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Eif2b5Q8CHW4 717 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Rabl3Q9D4V7 236 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Aff4Q9ESC8 1160 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Trpv2Q9WTR1 756 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Dctn3Q9Z0Y1 186 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 4930469K13RikA0A286YDB2 92 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 4930444G20RikD3Z741 495 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Srp72F8VQC1 671 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Nr2c1Q505F1 590 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Thrap3Q569Z6 951 aaKnown RBP9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Tpp2Q64514 1262 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Lrfn2Q80TG9 788 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Baiap2l2Q80Y61 522 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Dpp9Q8BVG4 862 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 MtrrQ8C1A3 696 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Atxn7Q8R4I1 867 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Atp13a1Q9EPE9 1200 aaKnown RBP9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Rims2Q9EQZ7 1530 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Gm28961A0A087WPA5 222 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Scgb2b18A0A087WPA9 112 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Gm21858A0A087WQ24 222 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Sec22bO08547 215 aaKnown RBP9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 CblP22682 913 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Usp4P35123 962 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Capn13Q3UW68 665 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Fam120bQ6RI63 786 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Slc38a7Q8BWH0 463 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Rbmx2Q8R0F5 326 aaKnown RBP9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Taf6lQ8R2K4 616 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Med24Q99K74 987 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Mrpl40Q9Z2Q5 206 aa9.79□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Igsf9bE9PZ19 1328 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Rag1P15919 1040 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Tab3Q571K4 716 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Spdye4aQ5IBH6 268 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Mkrn3Q60764 544 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Bcap29Q61334 240 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Foxn1Q61575 648 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Kbtbd13Q8C828 458 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Uba3Q8C878 462 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Fbxl13Q8CDU4 790 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Noxred1Q9D3S5 366 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Tob2Q9JM55 345 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Slc25a13Q9QXX4 676 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Ace3D0G895 737 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Cyp2c69E9PXC3 491 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Gm8897L7N294 181 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Trappc3O55013 180 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Cyp2c40P56657 491 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Asprv1Q09PK2 339 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Myo1dQ5SYD0 1006 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Slc13a5Q67BT3 572 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 WhrnQ80VW5 918 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Lman1lQ8VCD3 505 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 JcadQ5DTX6 1320 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Serpinb9O08797 374 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Lsp1P19973 330 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 RasefQ5RI75 627 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Prl2c1Q5SVL9 228 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Q6GQU0 248 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Scfd2Q8BTY8 684 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Zhx2Q8C0C0 836 aaKnown RBP9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Nsl1Q8K305 281 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 GrapQ9CX99 217 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Gm1141B9EJU1 475 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 1700024B05RikE9Q6D7 167 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Cyp2c68K7N6C2 491 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Ctnnd2O35927 1247 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Slc16a2O70324 545 aa9.78□□□□□ -0.84
Prpf40a-201ENSMUST00000076313 Pou4f1P17208 421 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms