RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 ATP15P21306 62 aa-1□□□□□ -2.57
snR55snR55 YJR015WP47090 510 aa-1□□□□□ -2.57
snR55snR55 UBC12P52491 188 aa-1□□□□□ -2.57
snR55snR55 THG1P53215 237 aaKnown RBP-1□□□□□ -2.57
snR55snR55 ABP140Q08641 628 aaKnown RBP-1□□□□□ -2.57
snR55snR55 DGA1Q08650 418 aa-1□□□□□ -2.57
snR55snR55 TCA17P32613 152 aa-1.01□□□□□ -2.57
snR55snR55 MAK5P38112 773 aaPredicted RBP-1.01□□□□□ -2.57
snR55snR55 YDR249CQ03787 373 aa-1.01□□□□□ -2.57
snR55snR55 RPL43AP0CX25 92 aaKnown RBP-1.02□□□□□ -2.57
snR55snR55 RPL43BP0CX26 92 aa-1.02□□□□□ -2.57
snR55snR55 YCR001WP25347 104 aa-1.02□□□□□ -2.57
snR55snR55 PAN3P36102 679 aaPredicted RBP-1.02□□□□□ -2.57
snR55snR55 ECM4P36156 370 aa-1.02□□□□□ -2.57
snR55snR55 HOC1P47124 396 aa-1.02□□□□□ -2.57
snR55snR55 TRM9P49957 279 aa-1.02□□□□□ -2.57
snR55snR55 PRM8P53174 237 aa-1.02□□□□□ -2.57
snR55snR55 YKR005CQ02203 525 aa-1.02□□□□□ -2.57
snR55snR55 YIL002W-AQ3E7Z5 69 aa-1.02□□□□□ -2.57
snR55snR55 RPL24AP04449 155 aaKnown RBP-1.03□□□□□ -2.57
snR55snR55 YLR157W-EP0CF00 54 aa-1.03□□□□□ -2.57
snR55snR55 URA5P13298 226 aaKnown RBP-1.03□□□□□ -2.57
snR55snR55 PHO85P17157 305 aa-1.03□□□□□ -2.57
snR55snR55 ALB1P47019 175 aaPredicted RBP-1.03□□□□□ -2.57
snR55snR55 EGD1Q02642 157 aaKnown RBP-1.03□□□□□ -2.57
snR55snR55 YLR173WQ06247 608 aa-1.03□□□□□ -2.57
snR55snR55 BET1P22804 142 aa-1.04□□□□□ -2.58
snR55snR55 IDH1P28834 360 aaKnown RBP RIP-Chip data-1.04□□□□□ -2.58not detected
snR55snR55 AIM25P47140 327 aa-1.04□□□□□ -2.58
snR55snR55 ELP6Q04868 273 aa-1.04□□□□□ -2.58
snR55snR55 PST2Q12335 198 aaKnown RBP-1.04□□□□□ -2.58
snR55snR55 DUR1,2P32528 1835 aaKnown RBP-1.04□□□□□ -2.58
snR55snR55 STF1P01098 86 aa-1.05□□□□□ -2.58
snR55snR55 POR1P04840 283 aaKnown RBP-1.05□□□□□ -2.58
snR55snR55 PTC1P35182 281 aa-1.05□□□□□ -2.58
snR55snR55 UPS1Q05776 175 aa-1.05□□□□□ -2.58
snR55snR55 IRC23Q08416 157 aa-1.05□□□□□ -2.58
snR55snR55 JLP1Q12358 412 aa-1.05□□□□□ -2.58
snR55snR55 BCY1P07278 416 aaKnown RBP-1.06□□□□□ -2.58
snR55snR55 RPB3P16370 318 aaKnown RBP-1.06□□□□□ -2.58
snR55snR55 ARO7P32178 256 aa-1.06□□□□□ -2.58
snR55snR55 NTF2P33331 125 aaKnown RBP-1.06□□□□□ -2.58
snR55snR55 PET100P38958 111 aa-1.06□□□□□ -2.58
snR55snR55 AST2P39945 430 aaKnown RBP-1.06□□□□□ -2.58
snR55snR55 NSA1P53136 463 aaPredicted RBP-1.06□□□□□ -2.58
snR55snR55 YFR032C-BQ8TGU2 87 aa-1.06□□□□□ -2.58
snR55snR55 KSS1P14681 368 aa-1.07□□□□□ -2.58
snR55snR55 EMC2P47133 292 aaKnown RBP-1.08□□□□□ -2.58
snR55snR55 YGR050CP53231 118 aa-1.08□□□□□ -2.58
snR55snR55 YDC1Q02896 317 aa-1.08□□□□□ -2.58
snR55snR55 CDC123Q05791 360 aa-1.08□□□□□ -2.58
snR55snR55 KEI1Q06346 221 aa-1.08□□□□□ -2.58
snR55snR55 SPT3P06844 337 aa-1.09□□□□□ -2.58
snR55snR55 YKR070WP36151 352 aaKnown RBP-1.09□□□□□ -2.58
snR55snR55 ETR1P38071 380 aa-1.09□□□□□ -2.58
snR55snR55 FAR7P43592 221 aa-1.09□□□□□ -2.58
snR55snR55 RRN5Q02983 363 aa-1.09□□□□□ -2.58
snR55snR55 CDC28P00546 298 aaKnown RBP-1.1□□□□□ -2.59
snR55snR55 PET191Q02772 108 aa-1.1□□□□□ -2.59
snR55snR55 GET4Q12125 312 aa-1.1□□□□□ -2.59
snR55snR55 IKI3Q06706 1349 aaKnown RBP-1.11□□□□□ -2.59
snR55snR55 URA6P15700 204 aa-1.11□□□□□ -2.59
snR55snR55 APS1P35181 156 aa-1.11□□□□□ -2.59
snR55snR55 SFK1P35735 353 aa-1.11□□□□□ -2.59
snR55snR55 YMR141CP40211 102 aa-1.11□□□□□ -2.59
snR55snR55 GET1P53192 235 aa-1.11□□□□□ -2.59
snR55snR55 YNL134CP53912 376 aaKnown RBP-1.11□□□□□ -2.59
snR55snR55 MED4Q12343 284 aa-1.11□□□□□ -2.59
snR55snR55 SNF2P22082 1703 aa-1.12□□□□□ -2.59
snR55snR55 TAO3P40468 2376 aa-1.12□□□□□ -2.59
snR55snR55 MRPL37P36532 105 aa-1.12□□□□□ -2.59
snR55snR55 YNG1Q08465 219 aa-1.12□□□□□ -2.59
snR55snR55 RRP36Q12481 300 aaPredicted RBP-1.12□□□□□ -2.59
snR55snR55 CFT1Q06632 1357 aaKnown RBP-1.12□□□□□ -2.59
snR55snR55 SEC4P07560 215 aaKnown RBP-1.13□□□□□ -2.59
snR55snR55 GSP2P32836 220 aaKnown RBP-1.13□□□□□ -2.59
snR55snR55 PTM1P32857 523 aa-1.13□□□□□ -2.59
snR55snR55 MPM1P40364 252 aa-1.13□□□□□ -2.59
snR55snR55 LIA1P47120 325 aaKnown RBP-1.13□□□□□ -2.59
snR55snR55 NOP19P53317 196 aaPredicted RBP-1.13□□□□□ -2.59
snR55snR55 ERV25P54837 211 aaKnown RBP-1.13□□□□□ -2.59
snR55snR55 RPO26P20435 155 aa-1.14□□□□□ -2.59
snR55snR55 OCH1P31755 480 aa-1.14□□□□□ -2.59
snR55snR55 CUE1P38428 203 aa-1.14□□□□□ -2.59
snR55snR55 YHR214C-EQ8TGK0 99 aa-1.14□□□□□ -2.59
snR55snR55 SEY1Q99287 776 aa-1.14□□□□□ -2.59
snR55snR55 ROM2P51862 1356 aaKnown RBP-1.15□□□□□ -2.59
snR55snR55 STF2P16965 84 aa-1.15□□□□□ -2.59
snR55snR55 RMD6P39975 231 aa-1.15□□□□□ -2.59
snR55snR55 ERG28P40030 148 aa-1.15□□□□□ -2.59
snR55snR55 RTT105P40063 208 aa-1.15□□□□□ -2.59
snR55snR55 YGL235WP53071 178 aa-1.15□□□□□ -2.59
snR55snR55 MRPL50P53724 139 aa-1.15□□□□□ -2.59
snR55snR55 YNL033WP53964 284 aa-1.15□□□□□ -2.59
snR55snR55 RRP17Q04031 235 aaPredicted RBP-1.15□□□□□ -2.59
snR55snR55 CKS1P20486 150 aaKnown RBP-1.16□□□□□ -2.6
snR55snR55 MRPL25P23369 157 aa-1.16□□□□□ -2.6
snR55snR55 YBL010CP32788 280 aa-1.16□□□□□ -2.6
snR55snR55 SHB17P36136 271 aaKnown RBP-1.16□□□□□ -2.6
snR55snR55 RPS29BP41058 56 aaKnown RBP-1.16□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 98.4 ms