RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	URA2	P07259	2214 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	UTP20	P35194	2493 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	BLM10	P43583	2143 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	YLR236C	A0A023PZG4	107 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	RPL27A	P0C2H6	136 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	NHP6B	P11633	99 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	KSS1	P14681	368 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	RPB3	P16370	318 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	STE18	P18852	110 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	COQ1	P18900	473 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	MRPS28	P21771	286 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	BET1	P22804	142 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	RFA3	P26755	122 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	PTM1	P32857	523 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	SSO1	P32867	290 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	BMH2	P34730	273 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	APS1	P35181	156 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	COX15	P40086	486 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	RSM25	P40496	264 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	IRC18	P47056	224 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	AIM25	P47140	327 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	PRM8	P53174	237 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	MPC3	P53311	146 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	MPA43	P53583	542 aa	Predicted RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	RAD28	Q12021	506 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	FSF1	Q12029	327 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	JLP1	Q12358	412 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	LSO2	Q3E772	92 aa	Known RBP	0.21	□□□□□ -2.38
VIK1	YPL253C	TSC3	Q3E790	80 aa		0.21	□□□□□ -2.38
VIK1	YPL253C	BRR2	P32639	2163 aa	Known RBP	0.2	□□□□□ -2.38
VIK1	YPL253C	POR1	P04840	283 aa	Known RBP	0.2	□□□□□ -2.38
VIK1	YPL253C	GPA2	P10823	449 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	SNC2	P33328	115 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	SKG1	P36169	355 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	HUA1	P40325	198 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	ERG10	P41338	398 aa	Known RBP	0.2	□□□□□ -2.38
VIK1	YPL253C	SAY1	P53324	424 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	LSM7	P53905	115 aa	Known RBP	0.2	□□□□□ -2.38
VIK1	YPL253C	COG5	P53951	403 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	UBC7	Q02159	165 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	GGA1	Q06336	557 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	ANT1	Q06497	328 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	GPM2	Q12008	311 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	MSB2	P32334	1306 aa		0.2	□□□□□ -2.38
VIK1	YPL253C	SEN1	Q00416	2231 aa	Known RBP	0.2	□□□□□ -2.38
VIK1	YPL253C	SLH1	P53327	1967 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	URA5	P13298	226 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	SEC11	P15367	167 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	CBF1	P17106	351 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	APA2	P22108	325 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	SPO13	P23624	291 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	TMA19	P35691	167 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	YCR087C-A	P37263	153 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YBR209W	P38311	105 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YBR285W	P38354	144 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	IKI1	P38874	309 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	RMD6	P39975	231 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YEL067C	P39978	195 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YEL008W	P40001	126 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YPL073C	P40323	161 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	GCN20	P43535	752 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	ERJ5	P43613	295 aa	Predicted RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	YML108W	Q03759	105 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	GRX3	Q03835	250 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	RNH202	Q05635	350 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	TOR2	P32600	2474 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	MET5	P47169	1442 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	RIF1	P29539	1916 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YIL177C	P40434	1758 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YJL225C	P40889	1758 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	HTB1	P02293	131 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	HTB2	P02294	131 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	RPL25	P04456	142 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	MRS1	P07266	363 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YHR212W-A	P0CX91	67 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	MATALPHA2	P0CY08	210 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	HMLALPHA2	P0CY09	210 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	NSP1	P14907	823 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	TFC1	P32367	649 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	OPY1	P38271	328 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	TVP23	P38962	199 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YER076C	P40049	302 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	RIO2	P40160	425 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	YRB1	P41920	201 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	ARP3	P47117	449 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	YJR111C	P47148	283 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	NOP19	P53317	196 aa	Predicted RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	PGA2	P53903	129 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YMR099C	Q03161	297 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	FYV12	Q08559	129 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	DGA1	Q08650	418 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	YRA1	Q12159	226 aa	Known RBP	0.19	□□□□□ -2.38
VIK1	YPL253C	YNL146C-A	Q3E7Z1	64 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	NCB2	Q92317	146 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	ATG40	Q99325	256 aa		0.19	□□□□□ -2.38
VIK1	YPL253C	QCR7	P00128	127 aa		0.18	□□□□□ -2.38
VIK1	YPL253C	CKS1	P20486	150 aa	Known RBP	0.18	□□□□□ -2.38
VIK1	YPL253C	CNB1	P25296	175 aa		0.18	□□□□□ -2.38
VIK1	YPL253C	YCL042W	P25572	119 aa		0.18	□□□□□ -2.38
VIK1	YPL253C	OCH1	P31755	480 aa		0.18	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms