RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W RPC17P47076 161 aa0.1□□□□□ -2.39
SGF11YPL047W LIA1P47120 325 aaKnown RBP0.1□□□□□ -2.39
SGF11YPL047W BRR6P53062 197 aa0.1□□□□□ -2.39
SGF11YPL047W SRL4Q03085 281 aa0.1□□□□□ -2.39
SGF11YPL047W KAP95Q06142 861 aaKnown RBP0.1□□□□□ -2.39
SGF11YPL047W CCW12Q12127 133 aa0.1□□□□□ -2.39
SGF11YPL047W ODC2Q99297 307 aa0.1□□□□□ -2.39
SGF11YPL047W DRS2P39524 1355 aa0.09□□□□□ -2.39
SGF11YPL047W KSS1P14681 368 aa0.09□□□□□ -2.4
SGF11YPL047W URA6P15700 204 aa0.09□□□□□ -2.4
SGF11YPL047W SEN2P16658 377 aa0.09□□□□□ -2.4
SGF11YPL047W ATP15P21306 62 aa0.09□□□□□ -2.4
SGF11YPL047W YCL042WP25572 119 aa0.09□□□□□ -2.4
SGF11YPL047W YHL018WP38744 120 aaPredicted RBP0.09□□□□□ -2.4
SGF11YPL047W YIL102CP40488 101 aa0.09□□□□□ -2.4
SGF11YPL047W MIC26P50087 233 aa0.09□□□□□ -2.4
SGF11YPL047W YGR050CP53231 118 aa0.09□□□□□ -2.4
SGF11YPL047W MPC3P53311 146 aa0.09□□□□□ -2.4
SGF11YPL047W FYV6P53913 173 aa0.09□□□□□ -2.4
SGF11YPL047W YDR274CP87283 123 aa0.09□□□□□ -2.4
SGF11YPL047W YLR283WQ05867 314 aa0.09□□□□□ -2.4
SGF11YPL047W DGA1Q08650 418 aa0.09□□□□□ -2.4
SGF11YPL047W CDC28P00546 298 aaKnown RBP0.08□□□□□ -2.4
SGF11YPL047W MGM101P32787 269 aaKnown RBP0.08□□□□□ -2.4
SGF11YPL047W NOP19P53317 196 aaPredicted RBP0.08□□□□□ -2.4
SGF11YPL047W SED1Q01589 338 aa0.08□□□□□ -2.4
SGF11YPL047W PRP11Q07350 266 aaPredicted RBP0.08□□□□□ -2.4
SGF11YPL047W YNG1Q08465 219 aa0.08□□□□□ -2.4
SGF11YPL047W MAG1P22134 296 aaKnown RBP0.07□□□□□ -2.4
SGF11YPL047W SSO1P32867 290 aa0.07□□□□□ -2.4
SGF11YPL047W YHL037CP38733 133 aa0.07□□□□□ -2.4
SGF11YPL047W FMC1P40491 155 aa0.07□□□□□ -2.4
SGF11YPL047W BNA6P43619 295 aa0.07□□□□□ -2.4
SGF11YPL047W ALB1P47019 175 aaPredicted RBP0.07□□□□□ -2.4
SGF11YPL047W BXI1P48558 297 aa0.07□□□□□ -2.4
SGF11YPL047W THG1P53215 237 aaKnown RBP0.07□□□□□ -2.4
SGF11YPL047W COG5P53951 403 aa0.07□□□□□ -2.4
SGF11YPL047W RRN5Q02983 363 aa0.07□□□□□ -2.4
SGF11YPL047W UPS3Q04006 179 aa0.07□□□□□ -2.4
SGF11YPL047W PRM3Q08931 133 aa0.07□□□□□ -2.4
SGF11YPL047W COX8P04039 78 aa0.06□□□□□ -2.4
SGF11YPL047W POR1P04840 283 aaKnown RBP0.06□□□□□ -2.4
SGF11YPL047W CKS1P20486 150 aaKnown RBP0.06□□□□□ -2.4
SGF11YPL047W PTM1P32857 523 aa0.06□□□□□ -2.4
SGF11YPL047W PAN3P36102 679 aaPredicted RBP0.06□□□□□ -2.4
SGF11YPL047W LDB7P38210 180 aa0.06□□□□□ -2.4
SGF11YPL047W RMD6P39975 231 aa0.06□□□□□ -2.4
SGF11YPL047W GCN20P43535 752 aaKnown RBP0.06□□□□□ -2.4
SGF11YPL047W DCV1P43595 202 aa0.06□□□□□ -2.4
SGF11YPL047W YJR111CP47148 283 aaKnown RBP0.06□□□□□ -2.4
SGF11YPL047W YMR295CQ03559 197 aa0.06□□□□□ -2.4
SGF11YPL047W YMR226CQ05016 267 aaKnown RBP0.06□□□□□ -2.4
SGF11YPL047W RNH202Q05635 350 aa0.06□□□□□ -2.4
SGF11YPL047W FIT2Q08906 153 aa0.06□□□□□ -2.4
SGF11YPL047W YOL107WQ12239 342 aa0.06□□□□□ -2.4
SGF11YPL047W SEY1Q99287 776 aa0.06□□□□□ -2.4
SGF11YPL047W IKI3Q06706 1349 aaKnown RBP0.06□□□□□ -2.4
SGF11YPL047W AHT1P29589 182 aa0.05□□□□□ -2.4
SGF11YPL047W OCH1P31755 480 aa0.05□□□□□ -2.4
SGF11YPL047W SFK1P35735 353 aa0.05□□□□□ -2.4
SGF11YPL047W MAK5P38112 773 aaPredicted RBP0.05□□□□□ -2.4
SGF11YPL047W AST2P39945 430 aaKnown RBP0.05□□□□□ -2.4
SGF11YPL047W COX15P40086 486 aa0.05□□□□□ -2.4
SGF11YPL047W ERG10P41338 398 aaKnown RBP0.05□□□□□ -2.4
SGF11YPL047W GET1P53192 235 aa0.05□□□□□ -2.4
SGF11YPL047W HNT1Q04344 158 aaKnown RBP0.05□□□□□ -2.4
SGF11YPL047W DYN3Q04949 312 aa0.05□□□□□ -2.4
SGF11YPL047W TAR1Q8TGM6 124 aa0.05□□□□□ -2.4
SGF11YPL047W YFR032C-BQ8TGU2 87 aa0.05□□□□□ -2.4
SGF11YPL047W FAS1P07149 2051 aaKnown RBP0.05□□□□□ -2.4
SGF11YPL047W RPL25P04456 142 aaKnown RBP0.04□□□□□ -2.4
SGF11YPL047W ARO7P32178 256 aa0.04□□□□□ -2.4
SGF11YPL047W TVP23P38962 199 aa0.04□□□□□ -2.4
SGF11YPL047W LSM7P53905 115 aaKnown RBP0.04□□□□□ -2.4
SGF11YPL047W MET31Q03081 177 aa0.04□□□□□ -2.4
SGF11YPL047W FIT1Q04433 528 aa0.04□□□□□ -2.4
SGF11YPL047W IRC23Q08416 157 aa0.04□□□□□ -2.4
SGF11YPL047W FYV12Q08559 129 aa0.04□□□□□ -2.4
SGF11YPL047W ABP140Q08641 628 aaKnown RBP0.04□□□□□ -2.4
SGF11YPL047W GCN3P14741 305 aa0.03□□□□□ -2.4
SGF11YPL047W RIB7P33312 244 aa0.03□□□□□ -2.4
SGF11YPL047W YAR064WP39563 99 aa0.03□□□□□ -2.4
SGF11YPL047W YFL051CP43552 160 aa0.03□□□□□ -2.4
SGF11YPL047W YJR015WP47090 510 aa0.03□□□□□ -2.4
SGF11YPL047W PET191Q02772 108 aa0.03□□□□□ -2.4
SGF11YPL047W RRT8Q08219 342 aa0.03□□□□□ -2.4
SGF11YPL047W GET4Q12125 312 aa0.03□□□□□ -2.4
SGF11YPL047W YPR013CQ12145 317 aa0.03□□□□□ -2.4
SGF11YPL047W CFT1Q06632 1357 aaKnown RBP0.03□□□□□ -2.4
SGF11YPL047W YPK2P18961 677 aa0.02□□□□□ -2.41
SGF11YPL047W CNB1P25296 175 aa0.02□□□□□ -2.41
SGF11YPL047W YCR090CP25654 182 aaKnown RBP0.02□□□□□ -2.41
SGF11YPL047W VMA6P32366 345 aaKnown RBP0.02□□□□□ -2.41
SGF11YPL047W HMF1P40037 129 aaKnown RBP0.02□□□□□ -2.41
SGF11YPL047W YER134CP40081 178 aa0.02□□□□□ -2.41
SGF11YPL047W SKI6P46948 246 aaPredicted RBP0.02□□□□□ -2.41
SGF11YPL047W IRC18P47056 224 aa0.02□□□□□ -2.41
SGF11YPL047W PDR17P53844 350 aa0.02□□□□□ -2.41
SGF11YPL047W VPS71Q03433 280 aa0.02□□□□□ -2.41
SGF11YPL047W TMA23Q03525 211 aa0.02□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms