RNA–Protein interactions for RNA: YOR089C

VPS21, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene VPS21, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS21YOR089C RMR1P53060 241 aa3.18□□□□□ -1.9
VPS21YOR089C BOL2P53082 120 aa3.18□□□□□ -1.9
VPS21YOR089C LSM3P57743 89 aaKnown RBP3.18□□□□□ -1.9
VPS21YOR089C PIR1Q03178 341 aa3.18□□□□□ -1.9
VPS21YOR089C HPT1Q04178 221 aaKnown RBP3.18□□□□□ -1.9
VPS21YOR089C YPR172WQ06608 200 aa3.18□□□□□ -1.9
VPS21YOR089C YPR011CQ12251 326 aa3.18□□□□□ -1.9
VPS21YOR089C PEX11Q12462 236 aa3.18□□□□□ -1.9
VPS21YOR089C SOD1P00445 154 aaKnown RBP3.17□□□□□ -1.9
VPS21YOR089C NMT1P14743 455 aa3.17□□□□□ -1.9
VPS21YOR089C BUB2P26448 306 aaPredicted RBP3.17□□□□□ -1.9
VPS21YOR089C RFA3P26755 122 aaKnown RBP3.17□□□□□ -1.9
VPS21YOR089C ASF2P32448 525 aaPredicted RBP3.17□□□□□ -1.9
VPS21YOR089C PTC1P35182 281 aa3.17□□□□□ -1.9
VPS21YOR089C MAK5P38112 773 aaPredicted RBP3.17□□□□□ -1.9
VPS21YOR089C HPM1P40481 377 aa3.17□□□□□ -1.9
VPS21YOR089C YIL001WP40560 513 aa3.17□□□□□ -1.9
VPS21YOR089C OST3P48439 350 aa3.17□□□□□ -1.9
VPS21YOR089C COS6P53344 381 aa3.17□□□□□ -1.9
VPS21YOR089C YNL010WP53981 241 aaKnown RBP3.17□□□□□ -1.9
VPS21YOR089C SNZ1Q03148 297 aa3.17□□□□□ -1.9
VPS21YOR089C TRM12Q04235 462 aa3.17□□□□□ -1.9
VPS21YOR089C GGA1Q06336 557 aa3.17□□□□□ -1.9
VPS21YOR089C MEU1Q07938 337 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
VPS21YOR089C MRX4Q12467 430 aa3.17□□□□□ -1.9
VPS21YOR089C YBL112CQ3E7Y4 105 aa3.17□□□□□ -1.9
VPS21YOR089C PEX34P25584 144 aa3.16□□□□□ -1.9
VPS21YOR089C TFC1P32367 649 aa3.16□□□□□ -1.9
VPS21YOR089C RPS1AP33442 255 aaKnown RBP3.16□□□□□ -1.9
VPS21YOR089C RIO2P40160 425 aaKnown RBP3.16□□□□□ -1.9
VPS21YOR089C BXI1P48558 297 aa3.16□□□□□ -1.9
VPS21YOR089C GTR2P53290 341 aa3.16□□□□□ -1.9
VPS21YOR089C NOP19P53317 196 aaPredicted RBP3.16□□□□□ -1.9
VPS21YOR089C ABF2Q02486 183 aa3.16□□□□□ -1.9
VPS21YOR089C NHP10Q03435 203 aa3.16□□□□□ -1.9
VPS21YOR089C EMI1Q04406 187 aa3.16□□□□□ -1.9
VPS21YOR089C DYN3Q04949 312 aa3.16□□□□□ -1.9
VPS21YOR089C TIM22Q12328 207 aa3.16□□□□□ -1.9
VPS21YOR089C YKL018C-AQ3E7A7 99 aa3.16□□□□□ -1.9
VPS21YOR089C HTL1Q9URQ5 78 aa3.16□□□□□ -1.9
VPS21YOR089C SEC22P22214 214 aa3.15□□□□□ -1.91
VPS21YOR089C YPT52P36018 234 aaKnown RBP3.15□□□□□ -1.91
VPS21YOR089C CAF4P36130 643 aa3.15□□□□□ -1.91
VPS21YOR089C PDX3P38075 228 aaKnown RBP3.15□□□□□ -1.91
VPS21YOR089C YIL059CP40520 121 aa3.15□□□□□ -1.91
VPS21YOR089C EFM5P53200 248 aaKnown RBP3.15□□□□□ -1.91
VPS21YOR089C PDR17P53844 350 aa3.15□□□□□ -1.91
VPS21YOR089C YMD8Q03697 442 aa3.15□□□□□ -1.91
VPS21YOR089C YML096WQ04489 525 aa3.15□□□□□ -1.91
VPS21YOR089C YPR114WQ06107 315 aa3.15□□□□□ -1.91
VPS21YOR089C YPL257WQ08974 193 aa3.15□□□□□ -1.91
VPS21YOR089C NSL1Q12143 216 aa3.15□□□□□ -1.91
VPS21YOR089C SAS5Q99314 248 aa3.15□□□□□ -1.91
VPS21YOR089C ADH3P07246 375 aaKnown RBP3.14□□□□□ -1.91
VPS21YOR089C GCN3P14741 305 aa3.14□□□□□ -1.91
VPS21YOR089C CCA1P21269 546 aa3.14□□□□□ -1.91
VPS21YOR089C ATP7P30902 174 aa3.14□□□□□ -1.91
VPS21YOR089C COS8P38723 381 aa3.14□□□□□ -1.91
VPS21YOR089C BMT5P40493 336 aa3.14□□□□□ -1.91
VPS21YOR089C GVP36P40531 326 aaKnown RBP3.14□□□□□ -1.91
VPS21YOR089C ERG10P41338 398 aaKnown RBP3.14□□□□□ -1.91
VPS21YOR089C FAR7P43592 221 aa3.14□□□□□ -1.91
VPS21YOR089C YJL016WP47072 561 aa3.14□□□□□ -1.91
VPS21YOR089C EMC4P53073 190 aa3.14□□□□□ -1.91
VPS21YOR089C YGL034CP53186 121 aa3.14□□□□□ -1.91
VPS21YOR089C DID2P69771 204 aa3.14□□□□□ -1.91
VPS21YOR089C YDR248CQ03786 193 aa3.14□□□□□ -1.91
VPS21YOR089C YDR114CQ04597 100 aa3.14□□□□□ -1.91
VPS21YOR089C SPC2Q04969 178 aa3.14□□□□□ -1.91
VPS21YOR089C CLP1Q08685 445 aaPredicted RBP3.14□□□□□ -1.91
VPS21YOR089C YOR020W-AQ3E824 90 aa3.14□□□□□ -1.91
VPS21YOR089C QCR7P00128 127 aa3.13□□□□□ -1.91
VPS21YOR089C CDC28P00546 298 aaKnown RBP3.13□□□□□ -1.91
VPS21YOR089C KSS1P14681 368 aa3.13□□□□□ -1.91
VPS21YOR089C SKG1P36169 355 aa3.13□□□□□ -1.91
VPS21YOR089C YCR087C-AP37263 153 aa3.13□□□□□ -1.91
VPS21YOR089C YGP1P38616 354 aaKnown RBP3.13□□□□□ -1.91
VPS21YOR089C ECM14P38836 430 aa3.13□□□□□ -1.91
VPS21YOR089C CYC2P38909 366 aa3.13□□□□□ -1.91
VPS21YOR089C PEX17P40155 199 aa3.13□□□□□ -1.91
VPS21YOR089C AYR1P40471 297 aa3.13□□□□□ -1.91
VPS21YOR089C MOB1P40484 314 aa3.13□□□□□ -1.91
VPS21YOR089C CAT5P41735 233 aa3.13□□□□□ -1.91
VPS21YOR089C FMP32P43557 207 aa3.13□□□□□ -1.91
VPS21YOR089C TOS8P53147 276 aa3.13□□□□□ -1.91
VPS21YOR089C PRM8P53174 237 aa3.13□□□□□ -1.91
VPS21YOR089C YNL033WP53964 284 aa3.13□□□□□ -1.91
VPS21YOR089C YNL019CP53975 284 aa3.13□□□□□ -1.91
VPS21YOR089C GTT2Q12390 233 aa3.13□□□□□ -1.91
VPS21YOR089C UBR1P19812 1950 aa3.12□□□□□ -1.91
VPS21YOR089C FPR1P20081 114 aaKnown RBP3.12□□□□□ -1.91
VPS21YOR089C MRPS28P21771 286 aa3.12□□□□□ -1.91
VPS21YOR089C DBF2P22204 572 aa3.12□□□□□ -1.91
VPS21YOR089C APS1P35181 156 aa3.12□□□□□ -1.91
VPS21YOR089C MRPL17P36528 281 aa3.12□□□□□ -1.91
VPS21YOR089C MDM34P53083 459 aa3.12□□□□□ -1.91
VPS21YOR089C YLR179CQ06252 201 aaKnown RBP3.12□□□□□ -1.91
VPS21YOR089C YOR342CQ12182 319 aa3.12□□□□□ -1.91
VPS21YOR089C GEP5Q12393 293 aa3.12□□□□□ -1.91
VPS21YOR089C MHT1Q12525 324 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms