RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C CHL4P38907 458 aa2.19□□□□□ -2.06
DNL4YOR005C YND1P40009 630 aa2.19□□□□□ -2.06
DNL4YOR005C YJR149WP47177 404 aa2.19□□□□□ -2.06
DNL4YOR005C YGL159WP53110 370 aa2.19□□□□□ -2.06
DNL4YOR005C YGL101WP53144 215 aa2.19□□□□□ -2.06
DNL4YOR005C YGR015CP53208 328 aa2.19□□□□□ -2.06
DNL4YOR005C GIM5Q04493 163 aa2.19□□□□□ -2.06
DNL4YOR005C KEI1Q06346 221 aa2.19□□□□□ -2.06
DNL4YOR005C ARR2Q06597 130 aa2.19□□□□□ -2.06
DNL4YOR005C YLR036CQ07986 203 aa2.19□□□□□ -2.06
DNL4YOR005C PLB3Q08108 686 aa2.19□□□□□ -2.06
DNL4YOR005C TRP1P00912 224 aa2.18□□□□□ -2.06
DNL4YOR005C TPI1P00942 248 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C RPL25P04456 142 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C YFR010W-AP0C5N0 62 aa2.18□□□□□ -2.06
DNL4YOR005C DPM1P14020 267 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C EPT1P22140 391 aa2.18□□□□□ -2.06
DNL4YOR005C MIR1P23641 311 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C KTI12P34253 313 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C SRY1P36007 326 aa2.18□□□□□ -2.06
DNL4YOR005C HMT1P38074 348 aa2.18□□□□□ -2.06
DNL4YOR005C POP8P38208 133 aa2.18□□□□□ -2.06
DNL4YOR005C MET30P39014 640 aa2.18□□□□□ -2.06
DNL4YOR005C BAT2P47176 376 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C NUP57P48837 541 aa2.18□□□□□ -2.06
DNL4YOR005C DOC1P53068 250 aa2.18□□□□□ -2.06
DNL4YOR005C ERV14P53173 138 aa2.18□□□□□ -2.06
DNL4YOR005C FMP41P53889 259 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C ASI3P53983 676 aa2.18□□□□□ -2.06
DNL4YOR005C DIA1P54005 336 aa2.18□□□□□ -2.06
DNL4YOR005C YMR315WQ04869 349 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C NOC4Q06512 552 aaPredicted RBP2.18□□□□□ -2.06
DNL4YOR005C MHR1Q06630 226 aa2.18□□□□□ -2.06
DNL4YOR005C YOR385WQ08909 290 aa2.18□□□□□ -2.06
DNL4YOR005C TIR4Q12218 487 aaPredicted RBP2.18□□□□□ -2.06
DNL4YOR005C YCT1Q12235 531 aa2.18□□□□□ -2.06
DNL4YOR005C YPR011CQ12251 326 aa2.18□□□□□ -2.06
DNL4YOR005C YDR157WA0A023PZE8 133 aa2.18□□□□□ -2.06
DNL4YOR005C CPR1P14832 162 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C MRPL44P19956 98 aa2.18□□□□□ -2.06
DNL4YOR005C EHD3P28817 500 aa2.18□□□□□ -2.06
DNL4YOR005C SPS19P32573 292 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C SOL2P37262 315 aa2.18□□□□□ -2.06
DNL4YOR005C PET8P38921 284 aa2.18□□□□□ -2.06
DNL4YOR005C COX15P40086 486 aa2.18□□□□□ -2.06
DNL4YOR005C CAT5P41735 233 aa2.18□□□□□ -2.06
DNL4YOR005C GNA1P43577 159 aaPredicted RBP2.18□□□□□ -2.06
DNL4YOR005C YJL016WP47072 561 aa2.18□□□□□ -2.06
DNL4YOR005C SCS3P53012 380 aa2.18□□□□□ -2.06
DNL4YOR005C UTP15Q04305 513 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C YPR114WQ06107 315 aa2.18□□□□□ -2.06
DNL4YOR005C SPC3Q12133 184 aa2.18□□□□□ -2.06
DNL4YOR005C YOR114WQ12219 294 aa2.18□□□□□ -2.06
DNL4YOR005C MCT1Q12283 360 aa2.18□□□□□ -2.06
DNL4YOR005C PST1Q12355 444 aa2.18□□□□□ -2.06
DNL4YOR005C SEC59P20048 519 aa2.18□□□□□ -2.06
DNL4YOR005C IFM1P25038 676 aa2.18□□□□□ -2.06
DNL4YOR005C YCR043CP25361 127 aa2.18□□□□□ -2.06
DNL4YOR005C CDC50P25656 391 aa2.18□□□□□ -2.06
DNL4YOR005C INO2P26798 304 aa2.18□□□□□ -2.06
DNL4YOR005C SRP102P36057 244 aaPredicted RBP2.18□□□□□ -2.06
DNL4YOR005C ATG8P38182 117 aaRIP-Chip data2.18□□□□□ -2.06not detected
DNL4YOR005C YPT31P38555 223 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C PRM5P40476 318 aa2.18□□□□□ -2.06
DNL4YOR005C XBP1P40489 647 aa2.18□□□□□ -2.06
DNL4YOR005C ICE2P40499 491 aa2.18□□□□□ -2.06
DNL4YOR005C YIR035CP40579 254 aa2.18□□□□□ -2.06
DNL4YOR005C UFE1P41834 346 aa2.18□□□□□ -2.06
DNL4YOR005C MOB2P43563 287 aa2.18□□□□□ -2.06
DNL4YOR005C NCA3P46955 337 aa2.18□□□□□ -2.06
DNL4YOR005C TPC1P53257 314 aa2.18□□□□□ -2.06
DNL4YOR005C MSO1P53604 210 aaKnown RBP2.18□□□□□ -2.06
DNL4YOR005C SWS2P53937 143 aa2.18□□□□□ -2.06
DNL4YOR005C YMR166CQ03829 368 aa2.18□□□□□ -2.06
DNL4YOR005C FIT1Q04433 528 aa2.18□□□□□ -2.06
DNL4YOR005C DPP1Q05521 289 aa2.18□□□□□ -2.06
DNL4YOR005C TPO4Q12256 659 aa2.18□□□□□ -2.06
DNL4YOR005C PEX11Q12462 236 aa2.18□□□□□ -2.06
DNL4YOR005C FOL3Q12676 427 aaPredicted RBP2.18□□□□□ -2.06
DNL4YOR005C HTB1P02293 131 aaKnown RBP2.17□□□□□ -2.06
DNL4YOR005C HTB2P02294 131 aa2.17□□□□□ -2.06
DNL4YOR005C RPS14AP06367 137 aaKnown RBP2.17□□□□□ -2.06
DNL4YOR005C MCK1P21965 375 aaKnown RBP2.17□□□□□ -2.06
DNL4YOR005C CSE2P33308 149 aa2.17□□□□□ -2.06
DNL4YOR005C SGE1P33335 543 aa2.17□□□□□ -2.06
DNL4YOR005C YBR096WP38256 230 aa2.17□□□□□ -2.06
DNL4YOR005C SUR2P38992 349 aa2.17□□□□□ -2.06
DNL4YOR005C RPS14BP39516 138 aaKnown RBP2.17□□□□□ -2.06
DNL4YOR005C PEX22P39718 180 aa2.17□□□□□ -2.06
DNL4YOR005C EMC5P40540 141 aa2.17□□□□□ -2.06
DNL4YOR005C HAC1P41546 238 aa2.17□□□□□ -2.06
DNL4YOR005C NSE4P43124 402 aa2.17□□□□□ -2.06
DNL4YOR005C MGA1P53050 456 aa2.17□□□□□ -2.06
DNL4YOR005C YPS5P53057 165 aa2.17□□□□□ -2.06
DNL4YOR005C YNR062CP53748 327 aa2.17□□□□□ -2.06
DNL4YOR005C WSC2P53832 503 aa2.17□□□□□ -2.06
DNL4YOR005C YNL162W-AQ3E7A8 72 aa2.17□□□□□ -2.06
DNL4YOR005C COA6Q3E846 104 aa2.17□□□□□ -2.06
DNL4YOR005C STE7P06784 515 aa2.17□□□□□ -2.06
DNL4YOR005C PHO2P07269 559 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms