RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS27	YNR006W	RPF1	P38805	295 aa	Known RBP	3.01	□□□□□ -1.93
VPS27	YNR006W	YEL075C	P39972	122 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	RMD6	P39975	231 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	SWP1	Q02795	286 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	TVP15	Q03860	143 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	GPI17	Q04080	534 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	LPP1	Q04396	274 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	YOL019W	Q08157	551 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	VPS15	P22219	1454 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	GDB1	Q06625	1536 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	COX10	P21592	462 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	PRE7	P23724	241 aa	Known RBP	3.01	□□□□□ -1.93
VPS27	YNR006W	SEC14	P24280	304 aa	Known RBP	3.01	□□□□□ -1.93
VPS27	YNR006W	YKL102C	P34249	101 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	TRR2	P38816	342 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	TEM1	P38987	245 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	ARP3	P47117	449 aa	Known RBP	3.01	□□□□□ -1.93
VPS27	YNR006W	MDM34	P53083	459 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	ARO8	P53090	500 aa	Known RBP	3.01	□□□□□ -1.93
VPS27	YNR006W	GAS3	Q03655	524 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	YML108W	Q03759	105 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	IRC20	Q06554	1556 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	YPR202W	Q08993	238 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	YLR046C	Q12253	270 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	SMT3	Q12306	101 aa	Known RBP	3.01	□□□□□ -1.93
VPS27	YNR006W	YMR230W-A	Q3E7B5	62 aa		3.01	□□□□□ -1.93
VPS27	YNR006W	FCY2	P17064	533 aa		3	□□□□□ -1.93
VPS27	YNR006W	PET9	P18239	318 aa	Known RBP	3	□□□□□ -1.93
VPS27	YNR006W	BUB2	P26448	306 aa	Predicted RBP	3	□□□□□ -1.93
VPS27	YNR006W	SEC17	P32602	292 aa		3	□□□□□ -1.93
VPS27	YNR006W	AST2	P39945	430 aa	Known RBP	3	□□□□□ -1.93
VPS27	YNR006W	MAK3	Q03503	176 aa		3	□□□□□ -1.93
VPS27	YNR006W	YDL211C	Q12121	372 aa		3	□□□□□ -1.93
VPS27	YNR006W	RIO1	Q12196	484 aa	Known RBP	3	□□□□□ -1.93
VPS27	YNR006W	YFR032C-B	Q8TGU2	87 aa		3	□□□□□ -1.93
VPS27	YNR006W	SPO14	P36126	1683 aa		3	□□□□□ -1.93
VPS27	YNR006W	IDP1	P21954	428 aa	Known RBP	2.99	□□□□□ -1.93
VPS27	YNR006W	FMP46	P36141	133 aa	Known RBP	2.99	□□□□□ -1.93
VPS27	YNR006W	IPI1	P38803	334 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS27	YNR006W	GLE2	P40066	365 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	YIL054W	P40524	105 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	UFE1	P41834	346 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	YJR111C	P47148	283 aa	Known RBP	2.99	□□□□□ -1.93
VPS27	YNR006W	SOL1	P50278	321 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	TRM12	Q04235	462 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	SUE1	Q06524	206 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	YLR031W	Q07978	186 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	DGA1	Q08650	418 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	YPL257W	Q08974	193 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	YPL162C	Q12042	273 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	GEA2	P39993	1459 aa	Known RBP	2.99	□□□□□ -1.93
VPS27	YNR006W	NUP159	P40477	1460 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	COX4	P04037	155 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	DSF1	P0CX08	502 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	YNR073C	P0CX09	502 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	TOM40	P23644	387 aa	Known RBP	2.99	□□□□□ -1.93
VPS27	YNR006W	ATG22	P25568	528 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	LDB16	P25587	256 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	CAX4	P53223	239 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	PGA1	P53896	198 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	PRR2	Q12310	699 aa		2.99	□□□□□ -1.93
VPS27	YNR006W	CCH1	P50077	2039 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	SEN2	P16658	377 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	SFC1	P33303	322 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	SFK1	P35735	353 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	TVP38	P36164	337 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	GPI18	P38211	433 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	YGP1	P38616	354 aa	Known RBP	2.98	□□□□□ -1.93
VPS27	YNR006W	YGR201C	P42936	225 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	YGL260W	P53056	76 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	YMD8	Q03697	442 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	YDR249C	Q03787	373 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	PLP1	Q04004	230 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	SLD7	Q08457	257 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	MPD1	Q12404	318 aa	Known RBP	2.98	□□□□□ -1.93
VPS27	YNR006W	YOR020W-A	Q3E824	90 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	ARO1	P08566	1588 aa	Known RBP	2.98	□□□□□ -1.93
VPS27	YNR006W	FLO11	P08640	1367 aa		2.98	□□□□□ -1.93
VPS27	YNR006W	PDR10	P51533	1564 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	YPR170W-B	P0C5R9	85 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	UBI4	P0CG63	381 aa	Known RBP	2.97	□□□□□ -1.93
VPS27	YNR006W	YBR063C	P38083	404 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	TRM7	P38238	310 aa	Known RBP	2.97	□□□□□ -1.93
VPS27	YNR006W	MEP2	P41948	499 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	RSM10	Q03201	203 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	MRX8	Q05473	314 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	IES4	Q08561	116 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	YPL264C	Q08980	353 aa		2.97	□□□□□ -1.93
VPS27	YNR006W	SGA1	P08019	549 aa		2.96	□□□□□ -1.93
VPS27	YNR006W	PKR1	Q03880	122 aa	Known RBP	2.96	□□□□□ -1.93
VPS27	YNR006W	SPC24	Q04477	213 aa		2.96	□□□□□ -1.93
VPS27	YNR006W	RFU1	Q08003	200 aa		2.96	□□□□□ -1.93
VPS27	YNR006W	PST1	Q12355	444 aa		2.96	□□□□□ -1.93
VPS27	YNR006W	SPO13	P23624	291 aa		2.96	□□□□□ -1.94
VPS27	YNR006W	RNP1	P32385	249 aa		2.96	□□□□□ -1.94
VPS27	YNR006W	CSH1	P38287	376 aa		2.96	□□□□□ -1.94
VPS27	YNR006W	SKI6	P46948	246 aa	Predicted RBP	2.96	□□□□□ -1.94
VPS27	YNR006W	IMP4	P53941	290 aa	Known RBP	2.96	□□□□□ -1.94
VPS27	YNR006W	GEP5	Q12393	293 aa		2.96	□□□□□ -1.94
VPS27	YNR006W	YLR361C-A	Q3E795	98 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms