RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YOR292CQ08743 309 aa3.25□□□□□ -1.89
PUB1YNL016W FDH1Q08911 376 aa3.25□□□□□ -1.89
PUB1YNL016W CYR1P08678 2026 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W TRP1P00912 224 aa3.25□□□□□ -1.89
PUB1YNL016W RAD10P06838 210 aa3.25□□□□□ -1.89
PUB1YNL016W PHO2P07269 559 aa3.25□□□□□ -1.89
PUB1YNL016W YFL068WP0CX99 160 aa3.25□□□□□ -1.89
PUB1YNL016W YLL066W-AP0CY00 160 aa3.25□□□□□ -1.89
PUB1YNL016W YLL067W-AP0CY01 160 aa3.25□□□□□ -1.89
PUB1YNL016W TRX3P25372 127 aa3.25□□□□□ -1.89
PUB1YNL016W SFC1P33303 322 aa3.25□□□□□ -1.89
PUB1YNL016W SCO2P38072 301 aa3.25□□□□□ -1.89
PUB1YNL016W FLO5P38894 1075 aa3.25□□□□□ -1.89
PUB1YNL016W AVT7P40501 490 aa3.25□□□□□ -1.89
PUB1YNL016W HAC1P41546 238 aa3.25□□□□□ -1.89
PUB1YNL016W CLD1P53264 445 aa3.25□□□□□ -1.89
PUB1YNL016W FMP41P53889 259 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W HSK3P69852 69 aa3.25□□□□□ -1.89
PUB1YNL016W OSH6Q02201 448 aa3.25□□□□□ -1.89
PUB1YNL016W ADD37Q03233 198 aa3.25□□□□□ -1.89
PUB1YNL016W MAK3Q03503 176 aa3.25□□□□□ -1.89
PUB1YNL016W YPD1Q07688 167 aa3.25□□□□□ -1.89
PUB1YNL016W YLR031WQ07978 186 aa3.25□□□□□ -1.89
PUB1YNL016W AYT1Q12226 474 aa3.25□□□□□ -1.89
PUB1YNL016W BBP1Q12365 385 aa3.25□□□□□ -1.89
PUB1YNL016W GTT2Q12390 233 aa3.25□□□□□ -1.89
PUB1YNL016W HHF1P02309 103 aaKnown RBP3.24□□□□□ -1.89
PUB1YNL016W MSI1P13712 422 aa3.24□□□□□ -1.89
PUB1YNL016W RPB5P20434 215 aa3.24□□□□□ -1.89
PUB1YNL016W YCR025CP25352 136 aa3.24□□□□□ -1.89
PUB1YNL016W TCA17P32613 152 aa3.24□□□□□ -1.89
PUB1YNL016W FRM2P37261 193 aa3.24□□□□□ -1.89
PUB1YNL016W SLM6P38343 150 aa3.24□□□□□ -1.89
PUB1YNL016W SSH1P38353 490 aaKnown RBP3.24□□□□□ -1.89
PUB1YNL016W ARN2P38724 620 aa3.24□□□□□ -1.89
PUB1YNL016W SEN34P39707 275 aa3.24□□□□□ -1.89
PUB1YNL016W YIL067CP40514 678 aa3.24□□□□□ -1.89
PUB1YNL016W RPR2P40571 144 aa3.24□□□□□ -1.89
PUB1YNL016W YJR111CP47148 283 aaKnown RBP3.24□□□□□ -1.89
PUB1YNL016W LSM7P53905 115 aaKnown RBP3.24□□□□□ -1.89
PUB1YNL016W AAH1P53909 347 aa3.24□□□□□ -1.89
PUB1YNL016W AIM34Q03673 198 aa3.24□□□□□ -1.89
PUB1YNL016W PKR1Q03880 122 aaKnown RBP3.24□□□□□ -1.89
PUB1YNL016W HPT1Q04178 221 aaKnown RBP3.24□□□□□ -1.89
PUB1YNL016W TRM12Q04235 462 aa3.24□□□□□ -1.89
PUB1YNL016W RFU1Q08003 200 aa3.24□□□□□ -1.89
PUB1YNL016W YOR097CQ12274 175 aaPredicted RBP3.24□□□□□ -1.89
PUB1YNL016W FAS1P07149 2051 aaKnown RBP3.23□□□□□ -1.89
PUB1YNL016W YHR139C-AO13536 103 aa3.23□□□□□ -1.89
PUB1YNL016W RPL15AP05748 204 aaKnown RBP3.23□□□□□ -1.89
PUB1YNL016W SOL2P37262 315 aa3.23□□□□□ -1.89
PUB1YNL016W DOG1P38774 246 aa3.23□□□□□ -1.89
PUB1YNL016W IPI1P38803 334 aaPredicted RBP3.23□□□□□ -1.89
PUB1YNL016W YJL213WP40896 331 aa3.23□□□□□ -1.89
PUB1YNL016W YGR201CP42936 225 aa3.23□□□□□ -1.89
PUB1YNL016W YJR085CP47131 105 aaKnown RBP3.23□□□□□ -1.89
PUB1YNL016W PRM8P53174 237 aa3.23□□□□□ -1.89
PUB1YNL016W YGL034CP53186 121 aa3.23□□□□□ -1.89
PUB1YNL016W SWP1Q02795 286 aa3.23□□□□□ -1.89
PUB1YNL016W GOT1Q03554 138 aa3.23□□□□□ -1.89
PUB1YNL016W MSA1Q08471 629 aa3.23□□□□□ -1.89
PUB1YNL016W AKR2Q12013 749 aa3.23□□□□□ -1.89
PUB1YNL016W YOR342CQ12182 319 aa3.23□□□□□ -1.89
PUB1YNL016W TRM10Q12400 293 aa3.23□□□□□ -1.89
PUB1YNL016W NHP6AP11632 93 aaKnown RBP3.22□□□□□ -1.89
PUB1YNL016W AHC2P25649 128 aa3.22□□□□□ -1.89
PUB1YNL016W YCR090CP25654 182 aaKnown RBP3.22□□□□□ -1.89
PUB1YNL016W BUB2P26448 306 aaPredicted RBP3.22□□□□□ -1.89
PUB1YNL016W ATS1P31386 333 aa3.22□□□□□ -1.89
PUB1YNL016W PRY2P36110 329 aa3.22□□□□□ -1.89
PUB1YNL016W SHE1P38200 338 aa3.22□□□□□ -1.89
PUB1YNL016W PRM5P40476 318 aa3.22□□□□□ -1.89
PUB1YNL016W EGT2P42835 1041 aa3.22□□□□□ -1.89
PUB1YNL016W YFL064CP43540 174 aa3.22□□□□□ -1.89
PUB1YNL016W NCA3P46955 337 aa3.22□□□□□ -1.89
PUB1YNL016W SNX4P47057 423 aa3.22□□□□□ -1.89
PUB1YNL016W AIM25P47140 327 aa3.22□□□□□ -1.89
PUB1YNL016W DYN2Q02647 92 aa3.22□□□□□ -1.89
PUB1YNL016W CSN9Q03981 162 aa3.22□□□□□ -1.89
PUB1YNL016W YDR124WQ04608 324 aa3.22□□□□□ -1.89
PUB1YNL016W YLR177WQ06251 628 aa3.22□□□□□ -1.89
PUB1YNL016W YPL257WQ08974 193 aa3.22□□□□□ -1.89
PUB1YNL016W MDM32Q12171 622 aa3.22□□□□□ -1.89
PUB1YNL016W MHT1Q12525 324 aa3.22□□□□□ -1.89
PUB1YNL016W YLR361C-AQ3E795 98 aa3.22□□□□□ -1.89
PUB1YNL016W SNF4P12904 322 aa3.21□□□□□ -1.9
PUB1YNL016W POP8P38208 133 aa3.21□□□□□ -1.9
PUB1YNL016W RBL2P48606 106 aaKnown RBP3.21□□□□□ -1.9
PUB1YNL016W BNS1P50084 137 aa3.21□□□□□ -1.9
PUB1YNL016W YGR015CP53208 328 aa3.21□□□□□ -1.9
PUB1YNL016W ERV29P53337 310 aa3.21□□□□□ -1.9
PUB1YNL016W HST4P53688 370 aa3.21□□□□□ -1.9
PUB1YNL016W DID2P69771 204 aa3.21□□□□□ -1.9
PUB1YNL016W TMA20P89886 181 aaPredicted RBP3.21□□□□□ -1.9
PUB1YNL016W PLP1Q04004 230 aa3.21□□□□□ -1.9
PUB1YNL016W WIP1Q2V2P8 89 aa3.21□□□□□ -1.9
PUB1YNL016W CPR1P14832 162 aaKnown RBP3.2□□□□□ -1.9
PUB1YNL016W PHO13P19881 312 aa3.2□□□□□ -1.9
PUB1YNL016W SEC14P24280 304 aaKnown RBP3.2□□□□□ -1.9
PUB1YNL016W ILV6P25605 309 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms