RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A YJR015WP47090 510 aa-0.66□□□□□ -2.52
YMR172C-AYMR172C-A FAS1P07149 2051 aaKnown RBP-0.66□□□□□ -2.52
YMR172C-AYMR172C-A UTP30P36144 274 aaKnown RBP-0.67□□□□□ -2.52
YMR172C-AYMR172C-A MRPL37P36532 105 aa-0.67□□□□□ -2.52
YMR172C-AYMR172C-A UBC12P52491 188 aa-0.67□□□□□ -2.52
YMR172C-AYMR172C-A VPS71Q03433 280 aa-0.67□□□□□ -2.52
YMR172C-AYMR172C-A TMA23Q03525 211 aa-0.67□□□□□ -2.52
YMR172C-AYMR172C-A CDC123Q05791 360 aa-0.67□□□□□ -2.52
YMR172C-AYMR172C-A YLR173WQ06247 608 aa-0.67□□□□□ -2.52
YMR172C-AYMR172C-A DGA1Q08650 418 aa-0.67□□□□□ -2.52
YMR172C-AYMR172C-A KSS1P14681 368 aa-0.68□□□□□ -2.52
YMR172C-AYMR172C-A CUE1P38428 203 aa-0.68□□□□□ -2.52
YMR172C-AYMR172C-A AST2P39945 430 aaKnown RBP-0.68□□□□□ -2.52
YMR172C-AYMR172C-A ALB1P47019 175 aaPredicted RBP-0.68□□□□□ -2.52
YMR172C-AYMR172C-A AIM25P47140 327 aa-0.68□□□□□ -2.52
YMR172C-AYMR172C-A MPC3P53311 146 aa-0.68□□□□□ -2.52
YMR172C-AYMR172C-A CFT1Q06632 1357 aaKnown RBP-0.69□□□□□ -2.52
YMR172C-AYMR172C-A SEN2P16658 377 aa-0.69□□□□□ -2.52
YMR172C-AYMR172C-A ARO7P32178 256 aa-0.69□□□□□ -2.52
YMR172C-AYMR172C-A PTM1P32857 523 aa-0.69□□□□□ -2.52
YMR172C-AYMR172C-A HOC1P47124 396 aa-0.69□□□□□ -2.52
YMR172C-AYMR172C-A YDR249CQ03787 373 aa-0.69□□□□□ -2.52
YMR172C-AYMR172C-A ELP6Q04868 273 aa-0.69□□□□□ -2.52
YMR172C-AYMR172C-A BCY1P07278 416 aaKnown RBP-0.7□□□□□ -2.52
YMR172C-AYMR172C-A ATP15P21306 62 aa-0.7□□□□□ -2.52
YMR172C-AYMR172C-A PAN3P36102 679 aaPredicted RBP-0.7□□□□□ -2.52
YMR172C-AYMR172C-A MAK5P38112 773 aaPredicted RBP-0.7□□□□□ -2.52
YMR172C-AYMR172C-A RMD6P39975 231 aa-0.7□□□□□ -2.52
YMR172C-AYMR172C-A ABP140Q08641 628 aaKnown RBP-0.7□□□□□ -2.52
YMR172C-AYMR172C-A TAR1Q8TGM6 124 aa-0.7□□□□□ -2.52
YMR172C-AYMR172C-A SEY1Q99287 776 aa-0.7□□□□□ -2.52
YMR172C-AYMR172C-A IKI3Q06706 1349 aaKnown RBP-0.7□□□□□ -2.52
YMR172C-AYMR172C-A YOL013W-AP0C272 63 aaPredicted RBP-0.71□□□□□ -2.52
YMR172C-AYMR172C-A OPI1P21957 404 aa-0.71□□□□□ -2.52
YMR172C-AYMR172C-A SFK1P35735 353 aa-0.71□□□□□ -2.52
YMR172C-AYMR172C-A MGA1P53050 456 aa-0.71□□□□□ -2.52
YMR172C-AYMR172C-A GET1P53192 235 aa-0.71□□□□□ -2.52
YMR172C-AYMR172C-A MRPL50P53724 139 aa-0.71□□□□□ -2.52
YMR172C-AYMR172C-A IRC23Q08416 157 aa-0.71□□□□□ -2.52
YMR172C-AYMR172C-A CDC28P00546 298 aaKnown RBP-0.72□□□□□ -2.52
YMR172C-AYMR172C-A URA6P15700 204 aa-0.72□□□□□ -2.52
YMR172C-AYMR172C-A RPB3P16370 318 aaKnown RBP-0.72□□□□□ -2.52
YMR172C-AYMR172C-A CKS1P20486 150 aaKnown RBP-0.72□□□□□ -2.52
YMR172C-AYMR172C-A YCR001WP25347 104 aa-0.72□□□□□ -2.52
YMR172C-AYMR172C-A IDH1P28834 360 aaKnown RBP RIP-Chip data-0.72□□□□□ -2.52not detected
YMR172C-AYMR172C-A APS1P35181 156 aa-0.72□□□□□ -2.52
YMR172C-AYMR172C-A HHY1P39982 102 aa-0.72□□□□□ -2.52
YMR172C-AYMR172C-A FAR7P43592 221 aa-0.72□□□□□ -2.52
YMR172C-AYMR172C-A SBH2P52871 88 aa-0.72□□□□□ -2.52
YMR172C-AYMR172C-A THG1P53215 237 aaKnown RBP-0.72□□□□□ -2.52
YMR172C-AYMR172C-A POR1P04840 283 aaKnown RBP-0.73□□□□□ -2.53
YMR172C-AYMR172C-A OM45P16547 393 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A MRPL25P23369 157 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A TCA17P32613 152 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A GSP2P32836 220 aaKnown RBP-0.73□□□□□ -2.53
YMR172C-AYMR172C-A PTC1P35182 281 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A YKR005CQ02203 525 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A PET191Q02772 108 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A RNH202Q05635 350 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A JLP1Q12358 412 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A YLR307C-AQ3E825 87 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A YFR032C-BQ8TGU2 87 aa-0.73□□□□□ -2.53
YMR172C-AYMR172C-A HFA1P32874 2273 aa-0.74□□□□□ -2.53
YMR172C-AYMR172C-A SPT3P06844 337 aa-0.74□□□□□ -2.53
YMR172C-AYMR172C-A BXI1P48558 297 aa-0.74□□□□□ -2.53
YMR172C-AYMR172C-A YDC1Q02896 317 aa-0.74□□□□□ -2.53
YMR172C-AYMR172C-A RRN5Q02983 363 aa-0.74□□□□□ -2.53
YMR172C-AYMR172C-A YMR295CQ03559 197 aa-0.74□□□□□ -2.53
YMR172C-AYMR172C-A UPS1Q05776 175 aa-0.74□□□□□ -2.53
YMR172C-AYMR172C-A DUR1,2P32528 1835 aaKnown RBP-0.75□□□□□ -2.53
YMR172C-AYMR172C-A RPL43AP0CX25 92 aaKnown RBP-0.75□□□□□ -2.53
YMR172C-AYMR172C-A RPL43BP0CX26 92 aa-0.75□□□□□ -2.53
YMR172C-AYMR172C-A NTF2P33331 125 aaKnown RBP-0.75□□□□□ -2.53
YMR172C-AYMR172C-A FYV6P53913 173 aa-0.75□□□□□ -2.53
YMR172C-AYMR172C-A KRE28Q04431 385 aa-0.75□□□□□ -2.53
YMR172C-AYMR172C-A KEI1Q06346 221 aa-0.75□□□□□ -2.53
YMR172C-AYMR172C-A GET4Q12125 312 aa-0.75□□□□□ -2.53
YMR172C-AYMR172C-A ARP3P47117 449 aaKnown RBP-0.76□□□□□ -2.53
YMR172C-AYMR172C-A LIA1P47120 325 aaKnown RBP-0.76□□□□□ -2.53
YMR172C-AYMR172C-A YGR050CP53231 118 aa-0.76□□□□□ -2.53
YMR172C-AYMR172C-A PDR17P53844 350 aa-0.76□□□□□ -2.53
YMR172C-AYMR172C-A ERV25P54837 211 aaKnown RBP-0.76□□□□□ -2.53
YMR172C-AYMR172C-A PAM18Q07914 168 aa-0.76□□□□□ -2.53
YMR172C-AYMR172C-A YKR070WP36151 352 aaKnown RBP-0.77□□□□□ -2.53
YMR172C-AYMR172C-A YNL134CP53912 376 aaKnown RBP-0.77□□□□□ -2.53
YMR172C-AYMR172C-A YOL107WQ12239 342 aa-0.77□□□□□ -2.53
YMR172C-AYMR172C-A YHR214C-EQ8TGK0 99 aa-0.77□□□□□ -2.53
YMR172C-AYMR172C-A YLR157W-EP0CF00 54 aa-0.78□□□□□ -2.53
YMR172C-AYMR172C-A STF2P16965 84 aa-0.78□□□□□ -2.53
YMR172C-AYMR172C-A HNT1Q04344 158 aaKnown RBP-0.78□□□□□ -2.53
YMR172C-AYMR172C-A PHO85P17157 305 aa-0.79□□□□□ -2.54
YMR172C-AYMR172C-A YCR090CP25654 182 aaKnown RBP-0.79□□□□□ -2.54
YMR172C-AYMR172C-A BNA6P43619 295 aa-0.79□□□□□ -2.54
YMR172C-AYMR172C-A BRR6P53062 197 aa-0.79□□□□□ -2.54
YMR172C-AYMR172C-A RRP17Q04031 235 aaPredicted RBP-0.79□□□□□ -2.54
YMR172C-AYMR172C-A MED4Q12343 284 aa-0.79□□□□□ -2.54
YMR172C-AYMR172C-A RRP36Q12481 300 aaPredicted RBP-0.79□□□□□ -2.54
YMR172C-AYMR172C-A MAG1P22134 296 aaKnown RBP-0.8□□□□□ -2.54
YMR172C-AYMR172C-A SSO1P32867 290 aa-0.8□□□□□ -2.54
YMR172C-AYMR172C-A ETR1P38071 380 aa-0.8□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms