RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C SEH1P53011 349 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C YNR066CP53752 436 aa3.94□□□□□ -1.78
EAR1YMR171C YIF1P53845 314 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C MEH1Q02205 184 aa3.94□□□□□ -1.78
EAR1YMR171C VPS28Q02767 242 aa3.94□□□□□ -1.78
EAR1YMR171C YMR253CQ04835 414 aa3.94□□□□□ -1.78
EAR1YMR171C PAL1Q05518 499 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C HNT3Q08702 217 aa3.94□□□□□ -1.78
EAR1YMR171C AIM45Q12480 344 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C GDH1P07262 454 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C ARF1P11076 181 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C MIR1P23641 311 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C STP22P25604 385 aa3.94□□□□□ -1.78
EAR1YMR171C CLB6P32943 380 aa3.94□□□□□ -1.78
EAR1YMR171C YKL097CP34245 136 aa3.94□□□□□ -1.78
EAR1YMR171C RPS27AP35997 82 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C PHD1P36093 366 aa3.94□□□□□ -1.78
EAR1YMR171C YPT31P38555 223 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C RPS27BP38711 82 aa3.94□□□□□ -1.78
EAR1YMR171C YHR210CP38893 341 aa3.94□□□□□ -1.78
EAR1YMR171C SLM1P40485 686 aa3.94□□□□□ -1.78
EAR1YMR171C PAU15P40585 124 aa3.94□□□□□ -1.78
EAR1YMR171C IKS1P47042 667 aa3.94□□□□□ -1.78
EAR1YMR171C SWS2P53937 143 aa3.94□□□□□ -1.78
EAR1YMR171C ARL3Q02804 198 aa3.94□□□□□ -1.78
EAR1YMR171C ADD37Q03233 198 aa3.94□□□□□ -1.78
EAR1YMR171C DIG2Q03373 323 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C THI74Q04083 370 aa3.94□□□□□ -1.78
EAR1YMR171C GMC1Q04399 608 aa3.94□□□□□ -1.78
EAR1YMR171C YMR254CQ04838 102 aa3.94□□□□□ -1.78
EAR1YMR171C DIC1Q06143 298 aa3.94□□□□□ -1.78
EAR1YMR171C YLR456WQ06199 204 aa3.94□□□□□ -1.78
EAR1YMR171C YPR147CQ06522 304 aaKnown RBP3.94□□□□□ -1.78
EAR1YMR171C YLR030WQ07967 263 aa3.94□□□□□ -1.78
EAR1YMR171C REX3Q12090 404 aa3.94□□□□□ -1.78
EAR1YMR171C SPO7P18410 259 aa3.93□□□□□ -1.78
EAR1YMR171C MXR2P25566 168 aa3.93□□□□□ -1.78
EAR1YMR171C CDC39P25655 2108 aaKnown RBP3.93□□□□□ -1.78
EAR1YMR171C POP5P28005 173 aa3.93□□□□□ -1.78
EAR1YMR171C FAA1P30624 700 aaKnown RBP3.93□□□□□ -1.78
EAR1YMR171C YNK1P36010 153 aaKnown RBP3.93□□□□□ -1.78
EAR1YMR171C SRX1P36077 127 aa3.93□□□□□ -1.78
EAR1YMR171C ARC40P38328 384 aaKnown RBP3.93□□□□□ -1.78
EAR1YMR171C TRS20P38334 175 aa3.93□□□□□ -1.78
EAR1YMR171C LSM4P40070 187 aaKnown RBP3.93□□□□□ -1.78
EAR1YMR171C SPG5P42933 373 aa3.93□□□□□ -1.78
EAR1YMR171C YFR054CP43622 192 aa3.93□□□□□ -1.78
EAR1YMR171C MGA1P53050 456 aa3.93□□□□□ -1.78
EAR1YMR171C YGL262WP53054 175 aa3.93□□□□□ -1.78
EAR1YMR171C BNA5Q05979 453 aa3.93□□□□□ -1.78
EAR1YMR171C CTS2Q06350 511 aa3.93□□□□□ -1.78
EAR1YMR171C MRX9Q07349 420 aaKnown RBP3.93□□□□□ -1.78
EAR1YMR171C SNA4Q07549 140 aa3.93□□□□□ -1.78
EAR1YMR171C PML1Q07930 204 aaPredicted RBP3.93□□□□□ -1.78
EAR1YMR171C RAD28Q12021 506 aa3.93□□□□□ -1.78
EAR1YMR171C AGC1Q12482 902 aa3.93□□□□□ -1.78
EAR1YMR171C BRR2P32639 2163 aaKnown RBP3.92□□□□□ -1.78
EAR1YMR171C POF1P25576 258 aa3.92□□□□□ -1.78
EAR1YMR171C EHD3P28817 500 aa3.92□□□□□ -1.78
EAR1YMR171C MRPL15P36523 253 aa3.92□□□□□ -1.78
EAR1YMR171C MRPS9P38120 278 aa3.92□□□□□ -1.78
EAR1YMR171C AVT5P38176 459 aa3.92□□□□□ -1.78
EAR1YMR171C OM14P38325 134 aa3.92□□□□□ -1.78
EAR1YMR171C YNL208WP40159 199 aaKnown RBP3.92□□□□□ -1.78
EAR1YMR171C AVT4P50944 713 aa3.92□□□□□ -1.78
EAR1YMR171C ERG25P53045 309 aa3.92□□□□□ -1.78
EAR1YMR171C YDR415CQ04033 374 aaPredicted RBP3.92□□□□□ -1.78
EAR1YMR171C YOR015WQ12169 119 aa3.92□□□□□ -1.78
EAR1YMR171C DCN1Q12395 269 aa3.92□□□□□ -1.78
EAR1YMR171C HMS1Q12398 434 aa3.92□□□□□ -1.78
EAR1YMR171C FAS1P07149 2051 aaKnown RBP3.92□□□□□ -1.78
EAR1YMR171C CDC36P06100 191 aaPredicted RBP3.91□□□□□ -1.78
EAR1YMR171C SLM6P38343 150 aa3.91□□□□□ -1.78
EAR1YMR171C PRS2P38620 318 aaKnown RBP3.91□□□□□ -1.78
EAR1YMR171C SUR2P38992 349 aa3.91□□□□□ -1.78
EAR1YMR171C FLX1P40464 311 aa3.91□□□□□ -1.78
EAR1YMR171C CIS3P47001 227 aa3.91□□□□□ -1.78
EAR1YMR171C SKO1Q02100 647 aa3.91□□□□□ -1.78
EAR1YMR171C YMR090WQ04304 227 aaKnown RBP3.91□□□□□ -1.78
EAR1YMR171C SEI1Q06058 285 aa3.91□□□□□ -1.78
EAR1YMR171C YOL029CQ08187 201 aa3.91□□□□□ -1.78
EAR1YMR171C FCY22Q12119 530 aa3.91□□□□□ -1.78
EAR1YMR171C YLR118CQ12354 227 aa3.91□□□□□ -1.78
EAR1YMR171C PRP46Q12417 451 aaPredicted RBP3.91□□□□□ -1.78
EAR1YMR171C YAL064W-BO13512 126 aa3.9□□□□□ -1.78
EAR1YMR171C TDH3P00359 332 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
EAR1YMR171C MES1P00958 751 aaKnown RBP3.9□□□□□ -1.78
EAR1YMR171C YCR043CP25361 127 aa3.9□□□□□ -1.78
EAR1YMR171C HSP150P32478 413 aa3.9□□□□□ -1.78
EAR1YMR171C NTF2P33331 125 aaKnown RBP3.9□□□□□ -1.78
EAR1YMR171C MBB1P39534 108 aa3.9□□□□□ -1.78
EAR1YMR171C RFC2P40348 353 aa3.9□□□□□ -1.78
EAR1YMR171C SMD3P43321 101 aaKnown RBP3.9□□□□□ -1.78
EAR1YMR171C MOB2P43563 287 aa3.9□□□□□ -1.78
EAR1YMR171C BLM10P43583 2143 aa3.9□□□□□ -1.78
EAR1YMR171C RPA34P47006 233 aaPredicted RBP3.9□□□□□ -1.78
EAR1YMR171C TRM9P49957 279 aa3.9□□□□□ -1.78
EAR1YMR171C YGL185CP53100 379 aa3.9□□□□□ -1.78
EAR1YMR171C YGL114WP53134 725 aa3.9□□□□□ -1.78
EAR1YMR171C ERV14P53173 138 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms