RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W PKR1Q03880 122 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W SEI1Q06058 285 aa3.29□□□□□ -1.88
ECM16YMR128W HUT1Q12520 339 aa3.29□□□□□ -1.88
ECM16YMR128W YPR053CQ6Q5F3 151 aa3.29□□□□□ -1.88
ECM16YMR128W UBA3Q99344 299 aa3.29□□□□□ -1.88
ECM16YMR128W CDC7P06243 507 aa3.29□□□□□ -1.88
ECM16YMR128W SPO13P23624 291 aa3.29□□□□□ -1.88
ECM16YMR128W ALK2P32789 676 aaPredicted RBP3.29□□□□□ -1.88
ECM16YMR128W GSP1P32835 219 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W GSP2P32836 220 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W SLM6P38343 150 aa3.29□□□□□ -1.88
ECM16YMR128W YHR210CP38893 341 aa3.29□□□□□ -1.88
ECM16YMR128W PRP39P39682 629 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W TSA2Q04120 196 aa3.29□□□□□ -1.88
ECM16YMR128W CTS2Q06350 511 aa3.29□□□□□ -1.88
ECM16YMR128W YOL118CQ08259 102 aa3.29□□□□□ -1.88
ECM16YMR128W ENB1Q08299 606 aa3.29□□□□□ -1.88
ECM16YMR128W YRA1Q12159 226 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W LEU9Q12166 604 aaKnown RBP3.29□□□□□ -1.88
ECM16YMR128W SPS4P09937 338 aa3.28□□□□□ -1.88
ECM16YMR128W EMP70P32802 667 aa3.28□□□□□ -1.88
ECM16YMR128W YPT31P38555 223 aaKnown RBP3.28□□□□□ -1.88
ECM16YMR128W SLZ1P40167 298 aa3.28□□□□□ -1.88
ECM16YMR128W MGA1P53050 456 aa3.28□□□□□ -1.88
ECM16YMR128W ERG13P54839 491 aaKnown RBP3.28□□□□□ -1.88
ECM16YMR128W PRR2Q12310 699 aa3.28□□□□□ -1.88
ECM16YMR128W IZH2Q12442 317 aa3.28□□□□□ -1.88
ECM16YMR128W ELO1P39540 310 aa3.28□□□□□ -1.88
ECM16YMR128W PCL7P40186 285 aa3.28□□□□□ -1.88
ECM16YMR128W CUP9P41817 306 aa3.28□□□□□ -1.88
ECM16YMR128W IDP2P41939 412 aa3.28□□□□□ -1.88
ECM16YMR128W SNO3P43544 222 aa3.28□□□□□ -1.88
ECM16YMR128W HIT1P46973 164 aa3.28□□□□□ -1.88
ECM16YMR128W CIS3P47001 227 aa3.28□□□□□ -1.88
ECM16YMR128W NDE2Q07500 545 aa3.28□□□□□ -1.88
ECM16YMR128W RPI1P23250 407 aaKnown RBP3.28□□□□□ -1.88
ECM16YMR128W SHB17P36136 271 aaKnown RBP3.28□□□□□ -1.88
ECM16YMR128W MRPL11P36521 249 aaPredicted RBP3.28□□□□□ -1.88
ECM16YMR128W YND1P40009 630 aa3.28□□□□□ -1.88
ECM16YMR128W NSA2P40078 261 aaKnown RBP3.28□□□□□ -1.88
ECM16YMR128W MOB1P40484 314 aa3.28□□□□□ -1.88
ECM16YMR128W MCP1Q12106 302 aa3.28□□□□□ -1.88
ECM16YMR128W YBR255C-AQ3E776 120 aa3.28□□□□□ -1.88
ECM16YMR128W RPL9AP05738 191 aaKnown RBP3.27□□□□□ -1.89
ECM16YMR128W AHT1P29589 182 aa3.27□□□□□ -1.89
ECM16YMR128W SHG1P38337 142 aa3.27□□□□□ -1.89
ECM16YMR128W RPA34P47006 233 aaPredicted RBP3.27□□□□□ -1.89
ECM16YMR128W RPL9BP51401 191 aaKnown RBP3.27□□□□□ -1.89
ECM16YMR128W MSO1P53604 210 aaKnown RBP3.27□□□□□ -1.89
ECM16YMR128W YNR066CP53752 436 aa3.27□□□□□ -1.89
ECM16YMR128W YVH1Q02256 364 aaKnown RBP3.27□□□□□ -1.89
ECM16YMR128W RSM10Q03201 203 aa3.27□□□□□ -1.89
ECM16YMR128W NAT5Q08689 176 aa3.27□□□□□ -1.89
ECM16YMR128W YCL001W-BQ96VH2 84 aa3.27□□□□□ -1.89
ECM16YMR128W COX5BP00425 151 aa3.27□□□□□ -1.89
ECM16YMR128W MSW1P04803 379 aa3.27□□□□□ -1.89
ECM16YMR128W TRP4P07285 380 aaPredicted RBP3.27□□□□□ -1.89
ECM16YMR128W EHD3P28817 500 aa3.27□□□□□ -1.89
ECM16YMR128W MRPS9P38120 278 aa3.27□□□□□ -1.89
ECM16YMR128W WSS1P38838 269 aa3.27□□□□□ -1.89
ECM16YMR128W TIF34P40217 347 aaKnown RBP3.27□□□□□ -1.89
ECM16YMR128W LTP1P40347 161 aa3.27□□□□□ -1.89
ECM16YMR128W SPG5P42933 373 aa3.27□□□□□ -1.89
ECM16YMR128W ATG27P46989 271 aa3.27□□□□□ -1.89
ECM16YMR128W PAU4P53427 120 aa3.27□□□□□ -1.89
ECM16YMR128W TRI1Q05024 226 aa3.27□□□□□ -1.89
ECM16YMR128W SME1Q12330 94 aaPredicted RBP3.27□□□□□ -1.89
ECM16YMR128W HUG1Q6Q5K6 68 aa3.27□□□□□ -1.89
ECM16YMR128W POR1P04840 283 aaKnown RBP3.27□□□□□ -1.89
ECM16YMR128W YSF3P0C074 85 aaPredicted RBP3.27□□□□□ -1.89
ECM16YMR128W GLC7P32598 312 aaKnown RBP3.27□□□□□ -1.89
ECM16YMR128W WSC4P38739 605 aa3.27□□□□□ -1.89
ECM16YMR128W SHR5P41912 237 aa3.27□□□□□ -1.89
ECM16YMR128W PAU5P43575 122 aa3.27□□□□□ -1.89
ECM16YMR128W LST7P53237 242 aa3.27□□□□□ -1.89
ECM16YMR128W IZH3Q07959 543 aa3.27□□□□□ -1.89
ECM16YMR128W GRE1Q08969 168 aa3.27□□□□□ -1.89
ECM16YMR128W FRE7Q12333 620 aa3.27□□□□□ -1.89
ECM16YMR128W YOR192C-CQ3E736 78 aa3.27□□□□□ -1.89
ECM16YMR128W TAD3Q9URQ3 322 aa3.27□□□□□ -1.89
ECM16YMR128W MES1P00958 751 aaKnown RBP3.26□□□□□ -1.89
ECM16YMR128W PAU19P0CE85 124 aa3.26□□□□□ -1.89
ECM16YMR128W PAU21P0CE86 164 aa3.26□□□□□ -1.89
ECM16YMR128W PAU22P0CE87 164 aa3.26□□□□□ -1.89
ECM16YMR128W PAU3P25610 124 aa3.26□□□□□ -1.89
ECM16YMR128W RCE1Q03530 315 aa3.26□□□□□ -1.89
ECM16YMR128W YMR090WQ04304 227 aaKnown RBP3.26□□□□□ -1.89
ECM16YMR128W CSI2Q08054 341 aa3.26□□□□□ -1.89
ECM16YMR128W ISA2Q12425 185 aa3.26□□□□□ -1.89
ECM16YMR128W PAU1P0CE88 120 aa3.26□□□□□ -1.89
ECM16YMR128W PAU14P0CE89 120 aa3.26□□□□□ -1.89
ECM16YMR128W PAU6P0CE90 120 aa3.26□□□□□ -1.89
ECM16YMR128W PAU18P0CE91 120 aa3.26□□□□□ -1.89
ECM16YMR128W PAU8P0CE92 120 aa3.26□□□□□ -1.89
ECM16YMR128W PAU11P0CE93 120 aa3.26□□□□□ -1.89
ECM16YMR128W PAU13P38725 120 aa3.26□□□□□ -1.89
ECM16YMR128W PFS1P38872 237 aa3.26□□□□□ -1.89
ECM16YMR128W XBP1P40489 647 aa3.26□□□□□ -1.89
ECM16YMR128W PAU10Q03050 120 aa3.26□□□□□ -1.89
ECM16YMR128W PAU20Q08322 120 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms