RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C CKA1P15790 372 aa3.83□□□□□ -1.8
CDC42YLR229C RPB8P20436 146 aa3.83□□□□□ -1.8
CDC42YLR229C SEC62P21825 274 aa3.83□□□□□ -1.8
CDC42YLR229C PET18P25362 215 aa3.83□□□□□ -1.8
CDC42YLR229C LSB5P25369 354 aa3.83□□□□□ -1.8
CDC42YLR229C HSP150P32478 413 aa3.83□□□□□ -1.8
CDC42YLR229C ALK2P32789 676 aaPredicted RBP3.83□□□□□ -1.8
CDC42YLR229C EMP70P32802 667 aa3.83□□□□□ -1.8
CDC42YLR229C NTF2P33331 125 aaKnown RBP3.83□□□□□ -1.8
CDC42YLR229C YHR210CP38893 341 aa3.83□□□□□ -1.8
CDC42YLR229C NOP16P40007 231 aaKnown RBP3.83□□□□□ -1.8
CDC42YLR229C NAS2P40555 220 aa3.83□□□□□ -1.8
CDC42YLR229C SPG5P42933 373 aa3.83□□□□□ -1.8
CDC42YLR229C SNO3P43544 222 aa3.83□□□□□ -1.8
CDC42YLR229C PAU5P43575 122 aa3.83□□□□□ -1.8
CDC42YLR229C YFR054CP43622 192 aa3.83□□□□□ -1.8
CDC42YLR229C BRR6P53062 197 aa3.83□□□□□ -1.8
CDC42YLR229C APS2Q00381 147 aa3.83□□□□□ -1.8
CDC42YLR229C ADD37Q03233 198 aa3.83□□□□□ -1.8
CDC42YLR229C SEI1Q06058 285 aa3.83□□□□□ -1.8
CDC42YLR229C CTR3Q06686 241 aa3.83□□□□□ -1.8
CDC42YLR229C YOL029CQ08187 201 aa3.83□□□□□ -1.8
CDC42YLR229C HNT3Q08702 217 aa3.83□□□□□ -1.8
CDC42YLR229C MCT1Q12283 360 aa3.83□□□□□ -1.8
CDC42YLR229C AGC1Q12482 902 aa3.83□□□□□ -1.8
CDC42YLR229C YOR343CQ12484 108 aa3.83□□□□□ -1.8
CDC42YLR229C UBA3Q99344 299 aa3.83□□□□□ -1.8
CDC42YLR229C OPI3P05375 206 aa3.82□□□□□ -1.8
CDC42YLR229C NHP6AP11632 93 aaKnown RBP3.82□□□□□ -1.8
CDC42YLR229C CTA1P15202 515 aa3.82□□□□□ -1.8
CDC42YLR229C AIM17P23180 465 aaKnown RBP3.82□□□□□ -1.8
CDC42YLR229C CPR2P23285 205 aa3.82□□□□□ -1.8
CDC42YLR229C TCA17P32613 152 aa3.82□□□□□ -1.8
CDC42YLR229C POP7P38291 140 aa3.82□□□□□ -1.8
CDC42YLR229C SLM6P38343 150 aa3.82□□□□□ -1.8
CDC42YLR229C GAT2P40209 560 aa3.82□□□□□ -1.8
CDC42YLR229C ERJ5P43613 295 aaPredicted RBP3.82□□□□□ -1.8
CDC42YLR229C LCL3P53153 274 aa3.82□□□□□ -1.8
CDC42YLR229C PAU4P53427 120 aa3.82□□□□□ -1.8
CDC42YLR229C NRM1P53718 249 aa3.82□□□□□ -1.8
CDC42YLR229C SMM1P53720 384 aaKnown RBP3.82□□□□□ -1.8
CDC42YLR229C SAM50P53969 484 aa3.82□□□□□ -1.8
CDC42YLR229C YDR415CQ04033 374 aaPredicted RBP3.82□□□□□ -1.8
CDC42YLR229C TVP18Q04767 167 aa3.82□□□□□ -1.8
CDC42YLR229C YLR179CQ06252 201 aaKnown RBP3.82□□□□□ -1.8
CDC42YLR229C PIN3Q06449 215 aa3.82□□□□□ -1.8
CDC42YLR229C IRC19Q07843 230 aa3.82□□□□□ -1.8
CDC42YLR229C SME1Q12330 94 aaPredicted RBP3.82□□□□□ -1.8
CDC42YLR229C YOP1Q12402 180 aa3.82□□□□□ -1.8
CDC42YLR229C YNR034W-AQ3E841 98 aa3.82□□□□□ -1.8
CDC42YLR229C YIL134C-AQ45U18 67 aa3.82□□□□□ -1.8
CDC42YLR229C COX1P00401 534 aa3.81□□□□□ -1.8
CDC42YLR229C SPS4P09937 338 aa3.81□□□□□ -1.8
CDC42YLR229C PAU1P0CE88 120 aa3.81□□□□□ -1.8
CDC42YLR229C PAU14P0CE89 120 aa3.81□□□□□ -1.8
CDC42YLR229C PAU6P0CE90 120 aa3.81□□□□□ -1.8
CDC42YLR229C PAU18P0CE91 120 aa3.81□□□□□ -1.8
CDC42YLR229C PAU8P0CE92 120 aa3.81□□□□□ -1.8
CDC42YLR229C PAU11P0CE93 120 aa3.81□□□□□ -1.8
CDC42YLR229C HAP3P13434 144 aa3.81□□□□□ -1.8
CDC42YLR229C YCR101CP25607 182 aa3.81□□□□□ -1.8
CDC42YLR229C YBR013CP38215 129 aa3.81□□□□□ -1.8
CDC42YLR229C UMP1P38293 148 aa3.81□□□□□ -1.8
CDC42YLR229C PAU13P38725 120 aa3.81□□□□□ -1.8
CDC42YLR229C YEL057CP39983 233 aa3.81□□□□□ -1.8
CDC42YLR229C NSA2P40078 261 aaKnown RBP3.81□□□□□ -1.8
CDC42YLR229C RFC2P40348 353 aa3.81□□□□□ -1.8
CDC42YLR229C XBP1P40489 647 aa3.81□□□□□ -1.8
CDC42YLR229C CIN5P40917 295 aa3.81□□□□□ -1.8
CDC42YLR229C CUP9P41817 306 aa3.81□□□□□ -1.8
CDC42YLR229C TAX4P47030 604 aa3.81□□□□□ -1.8
CDC42YLR229C COX16P47081 118 aa3.81□□□□□ -1.8
CDC42YLR229C YJR011CP47086 261 aaPredicted RBP3.81□□□□□ -1.8
CDC42YLR229C OST3P48439 350 aa3.81□□□□□ -1.8
CDC42YLR229C PAU10Q03050 120 aa3.81□□□□□ -1.8
CDC42YLR229C YMR090WQ04304 227 aaKnown RBP3.81□□□□□ -1.8
CDC42YLR229C SEN15Q04675 128 aa3.81□□□□□ -1.8
CDC42YLR229C MIM1Q08176 113 aa3.81□□□□□ -1.8
CDC42YLR229C PAU20Q08322 120 aa3.81□□□□□ -1.8
CDC42YLR229C YRA1Q12159 226 aaKnown RBP3.81□□□□□ -1.8
CDC42YLR229C POM33Q12164 279 aa3.81□□□□□ -1.8
CDC42YLR229C YOR015WQ12169 119 aa3.81□□□□□ -1.8
CDC42YLR229C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
CDC42YLR229C PAA1Q12447 191 aaKnown RBP3.81□□□□□ -1.8
CDC42YLR229C PAU9Q3E770 120 aa3.81□□□□□ -1.8
CDC42YLR229C YDR157WA0A023PZE8 133 aa3.8□□□□□ -1.8
CDC42YLR229C RPL7AP05737 244 aaKnown RBP3.8□□□□□ -1.8
CDC42YLR229C PDX1P16451 410 aa3.8□□□□□ -1.8
CDC42YLR229C STE18P18852 110 aa3.8□□□□□ -1.8
CDC42YLR229C SCO1P23833 295 aa3.8□□□□□ -1.8
CDC42YLR229C PPA2P28239 310 aa3.8□□□□□ -1.8
CDC42YLR229C AIM29P36154 155 aa3.8□□□□□ -1.8
CDC42YLR229C RPB11P38902 120 aa3.8□□□□□ -1.8
CDC42YLR229C PAC2P39937 518 aa3.8□□□□□ -1.8
CDC42YLR229C BNS1P50084 137 aa3.8□□□□□ -1.8
CDC42YLR229C PDR16P53860 351 aaKnown RBP3.8□□□□□ -1.8
CDC42YLR229C BUD25P85052 153 aa3.8□□□□□ -1.8
CDC42YLR229C VPS28Q02767 242 aa3.8□□□□□ -1.8
CDC42YLR229C GIS1Q03833 894 aa3.8□□□□□ -1.8
CDC42YLR229C YPR147CQ06522 304 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms