RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeast

Gene HCR1, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCR1	YLR192C	UFD1	P53044	361 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	YGL159W	P53110	370 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	API2	Q04413	109 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	ATP16	Q12165	160 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	MED4	Q12343	284 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	YLR146W-A	Q2V2P1	62 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	YJR112W-A	Q3E743	109 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	UBA3	Q99344	299 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	QCR2	P07257	368 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	YML003W	P0CF16	290 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	UBI4	P0CG63	381 aa	Known RBP	4.82	□□□□□ -1.64
HCR1	YLR192C	RPL35A	P0CX84	120 aa	Known RBP	4.82	□□□□□ -1.64
HCR1	YLR192C	RPL35B	P0CX85	120 aa	Known RBP	4.82	□□□□□ -1.64
HCR1	YLR192C	OLE1	P21147	510 aa	Known RBP	4.82	□□□□□ -1.64
HCR1	YLR192C	CNB1	P25296	175 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	REC114	P32841	428 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	VAM7	P32912	316 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	SRY1	P36007	326 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	SHG1	P38337	142 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	HAM1	P47119	197 aa	Known RBP	4.82	□□□□□ -1.64
HCR1	YLR192C	SNN1	P48232	102 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	UBP8	P50102	471 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	INN1	P53901	409 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	MRP51	Q02950	344 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	CAC2	Q04199	468 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	GRC3	Q07845	632 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	RFU1	Q08003	200 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	FIT3	Q08907	204 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	YCT1	Q12235	531 aa		4.82	□□□□□ -1.64
HCR1	YLR192C	FOL3	Q12676	427 aa	Predicted RBP	4.82	□□□□□ -1.64
HCR1	YLR192C	CDC28	P00546	298 aa	Known RBP	4.81	□□□□□ -1.64
HCR1	YLR192C	MRP2	P10663	115 aa	Predicted RBP	4.81	□□□□□ -1.64
HCR1	YLR192C	ARO3	P14843	370 aa	Known RBP	4.81	□□□□□ -1.64
HCR1	YLR192C	YCR101C	P25607	182 aa		4.81	□□□□□ -1.64
HCR1	YLR192C	DEG1	P31115	442 aa	Known RBP	4.81	□□□□□ -1.64
HCR1	YLR192C	YHC3	P47040	408 aa		4.81	□□□□□ -1.64
HCR1	YLR192C	NSA1	P53136	463 aa	Predicted RBP	4.81	□□□□□ -1.64
HCR1	YLR192C	PKP2	P53170	491 aa		4.81	□□□□□ -1.64
HCR1	YLR192C	GPI15	P53961	229 aa		4.81	□□□□□ -1.64
HCR1	YLR192C	RPL15B	P54780	204 aa	Predicted RBP	4.81	□□□□□ -1.64
HCR1	YLR192C	ODC1	Q03028	310 aa		4.81	□□□□□ -1.64
HCR1	YLR192C	BER1	Q06688	274 aa	Known RBP	4.81	□□□□□ -1.64
HCR1	YLR192C	RRT7	Q07829	113 aa		4.81	□□□□□ -1.64
HCR1	YLR192C	TDH1	P00360	332 aa	Known RBP	4.8	□□□□□ -1.64
HCR1	YLR192C	CKA1	P15790	372 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	RPI1	P23250	407 aa	Known RBP	4.8	□□□□□ -1.64
HCR1	YLR192C	MIR1	P23641	311 aa	Known RBP	4.8	□□□□□ -1.64
HCR1	YLR192C	MRPS5	P33759	307 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	ARC40	P38328	384 aa	Known RBP	4.8	□□□□□ -1.64
HCR1	YLR192C	SLM1	P40485	686 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	EMC5	P40540	141 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	BLM10	P43583	2143 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	MCM22	P47167	239 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	MEH1	Q02205	184 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	THI74	Q04083	370 aa		4.8	□□□□□ -1.64
HCR1	YLR192C	PCL1	P24867	279 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	MSK1	P32048	576 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	CLB6	P32943	380 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	ECM31	P38122	312 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	YND1	P40009	630 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	OST1	P41543	476 aa	Known RBP	4.79	□□□□□ -1.64
HCR1	YLR192C	AGX1	P43567	385 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	SSN8	P47821	323 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	ERV25	P54837	211 aa	Known RBP	4.79	□□□□□ -1.64
HCR1	YLR192C	YCL001W-A	P87012	153 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	ERP1	Q05359	219 aa	Known RBP	4.79	□□□□□ -1.64
HCR1	YLR192C	YPR098C	Q06089	161 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	SDO1	Q07953	250 aa	Known RBP	4.79	□□□□□ -1.64
HCR1	YLR192C	YOL029C	Q08187	201 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	ZEO1	Q08245	113 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	RRS1	Q08746	203 aa	Known RBP	4.79	□□□□□ -1.64
HCR1	YLR192C	VMA9	Q3E7B6	73 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	YLR365W	Q7LIF2	110 aa		4.79	□□□□□ -1.64
HCR1	YLR192C	SAG1	P20840	650 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	PEX4	P29340	183 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	GLC7	P32598	312 aa	Known RBP	4.78	□□□□□ -1.64
HCR1	YLR192C	MCH2	P36032	473 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	YKL162C	P36052	402 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	ERV15	P38312	142 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	YEA6	P39953	335 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	POG1	P40473	351 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	YIL029C	P40538	142 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	EGT2	P42835	1041 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	RPA34	P47006	233 aa	Predicted RBP	4.78	□□□□□ -1.64
HCR1	YLR192C	GWT1	P47026	490 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	SOL1	P50278	321 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	FMP41	P53889	259 aa	Known RBP	4.78	□□□□□ -1.64
HCR1	YLR192C	APJ1	P53940	528 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	VPS28	Q02767	242 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	YDC1	Q02896	317 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	YDR286C	Q05530	114 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	PIN3	Q06449	215 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	YOR186W	Q08560	144 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	PCC1	Q3E833	88 aa		4.78	□□□□□ -1.64
HCR1	YLR192C	RPL25	P04456	142 aa	Known RBP	4.77	□□□□□ -1.65
HCR1	YLR192C	RPS23A	P0CX29	145 aa	Known RBP	4.77	□□□□□ -1.65
HCR1	YLR192C	RPS23B	P0CX30	145 aa		4.77	□□□□□ -1.65
HCR1	YLR192C	YBR220C	P38318	560 aa		4.77	□□□□□ -1.65
HCR1	YLR192C	PRS3	P38689	320 aa	Known RBP	4.77	□□□□□ -1.65
HCR1	YLR192C	IKI1	P38874	309 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms