RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YGR296C-BP0CX96 160 aa2.05□□□□□ -2.08
VPS13YLL040C YPL283W-BP0CX97 160 aa2.05□□□□□ -2.08
VPS13YLL040C YPR204C-AP0CX98 160 aa2.05□□□□□ -2.08
VPS13YLL040C PIC2P40035 300 aa2.05□□□□□ -2.08
VPS13YLL040C SSU72P53538 206 aaPredicted RBP2.05□□□□□ -2.08
VPS13YLL040C ERG2P32352 222 aa2.05□□□□□ -2.08
VPS13YLL040C POP7P38291 140 aa2.05□□□□□ -2.08
VPS13YLL040C YMR262WP38430 313 aa2.05□□□□□ -2.08
VPS13YLL040C SHR5P41912 237 aa2.05□□□□□ -2.08
VPS13YLL040C TTI2P47168 421 aa2.05□□□□□ -2.08
VPS13YLL040C ATG4P53867 494 aa2.05□□□□□ -2.08
VPS13YLL040C RPL20AP0CX23 172 aaKnown RBP2.05□□□□□ -2.08
VPS13YLL040C RPL20BP0CX24 172 aaPredicted RBP2.05□□□□□ -2.08
VPS13YLL040C UIP3P39547 235 aa2.05□□□□□ -2.08
VPS13YLL040C MPA43P53583 542 aaPredicted RBP2.05□□□□□ -2.08
VPS13YLL040C YNR034W-AQ3E841 98 aa2.05□□□□□ -2.08
VPS13YLL040C NAG1Q8TGN9 163 aa2.05□□□□□ -2.08
VPS13YLL040C ADK1P07170 222 aaKnown RBP2.05□□□□□ -2.08
VPS13YLL040C PDX1P16451 410 aa2.05□□□□□ -2.08
VPS13YLL040C SPI1P40092 148 aa2.05□□□□□ -2.08
VPS13YLL040C MCM22P47167 239 aa2.05□□□□□ -2.08
VPS13YLL040C YPL162CQ12042 273 aa2.05□□□□□ -2.08
VPS13YLL040C YLR146W-AQ2V2P1 62 aa2.05□□□□□ -2.08
VPS13YLL040C YGR151CP53287 111 aa2.05□□□□□ -2.08
VPS13YLL040C OGG1P53397 376 aaPredicted RBP2.05□□□□□ -2.08
VPS13YLL040C STD1Q02794 444 aa2.05□□□□□ -2.08
VPS13YLL040C MID1P41821 548 aa2.05□□□□□ -2.08
VPS13YLL040C YJR012CP47087 207 aa2.05□□□□□ -2.08
VPS13YLL040C YJR056CP47115 236 aa2.05□□□□□ -2.08
VPS13YLL040C SWS2P53937 143 aa2.05□□□□□ -2.08
VPS13YLL040C SCW10Q04951 389 aa2.05□□□□□ -2.08
VPS13YLL040C YLR296WQ05898 108 aa2.05□□□□□ -2.08
VPS13YLL040C SEC11P15367 167 aa2.05□□□□□ -2.08
VPS13YLL040C MRPL20P22354 195 aaPredicted RBP2.05□□□□□ -2.08
VPS13YLL040C FEN2P25621 512 aaKnown RBP2.05□□□□□ -2.08
VPS13YLL040C URK1P27515 501 aa2.05□□□□□ -2.08
VPS13YLL040C SSS1P35179 80 aa2.05□□□□□ -2.08
VPS13YLL040C RPL10P41805 221 aaKnown RBP2.05□□□□□ -2.08
VPS13YLL040C HNT2P49775 206 aa2.05□□□□□ -2.08
VPS13YLL040C UPS3Q04006 179 aa2.05□□□□□ -2.08
VPS13YLL040C YPR109WQ06104 294 aa2.05□□□□□ -2.08
VPS13YLL040C DCI1Q08558 271 aa2.05□□□□□ -2.08
VPS13YLL040C GAS1P22146 559 aaKnown RBP2.05□□□□□ -2.08
VPS13YLL040C TCA17P32613 152 aa2.05□□□□□ -2.08
VPS13YLL040C YKL044WP36092 106 aa2.05□□□□□ -2.08
VPS13YLL040C CTK2P46962 323 aa2.05□□□□□ -2.08
VPS13YLL040C YRA1Q12159 226 aaKnown RBP2.05□□□□□ -2.08
VPS13YLL040C GRE3P38715 327 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
VPS13YLL040C UME6P39001 836 aa2.04□□□□□ -2.08
VPS13YLL040C AGE2P40529 298 aa2.04□□□□□ -2.08
VPS13YLL040C HRI1Q05905 244 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C YDL242WQ07746 117 aa2.04□□□□□ -2.08
VPS13YLL040C ATG5Q12380 294 aa2.04□□□□□ -2.08
VPS13YLL040C NTF2P33331 125 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C EGT2P42835 1041 aa2.04□□□□□ -2.08
VPS13YLL040C EMC4P53073 190 aa2.04□□□□□ -2.08
VPS13YLL040C MRX11Q03079 207 aa2.04□□□□□ -2.08
VPS13YLL040C FSH2Q05015 223 aa2.04□□□□□ -2.08
VPS13YLL040C SEI1Q06058 285 aa2.04□□□□□ -2.08
VPS13YLL040C POM33Q12164 279 aa2.04□□□□□ -2.08
VPS13YLL040C GLC7P32598 312 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C PDR17P53844 350 aa2.04□□□□□ -2.08
VPS13YLL040C TRI1Q05024 226 aa2.04□□□□□ -2.08
VPS13YLL040C DIC1Q06143 298 aa2.04□□□□□ -2.08
VPS13YLL040C YCR025CP25352 136 aa2.04□□□□□ -2.08
VPS13YLL040C YCK3P39962 524 aa2.04□□□□□ -2.08
VPS13YLL040C NSA2P40078 261 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C PIG2P40187 538 aa2.04□□□□□ -2.08
VPS13YLL040C NIT2P47016 307 aa2.04□□□□□ -2.08
VPS13YLL040C YIP4P53093 235 aa2.04□□□□□ -2.08
VPS13YLL040C CRH1P53301 507 aa2.04□□□□□ -2.08
VPS13YLL040C ALG9P53868 555 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C VPS28Q02767 242 aa2.04□□□□□ -2.08
VPS13YLL040C FCY22Q12119 530 aa2.04□□□□□ -2.08
VPS13YLL040C GDH1P07262 454 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C IMG1P25626 169 aa2.04□□□□□ -2.08
VPS13YLL040C COQ3P27680 312 aa2.04□□□□□ -2.08
VPS13YLL040C UTR5P32630 166 aa2.04□□□□□ -2.08
VPS13YLL040C YBR013CP38215 129 aa2.04□□□□□ -2.08
VPS13YLL040C TRS23Q03784 219 aa2.04□□□□□ -2.08
VPS13YLL040C FRQ1Q06389 190 aa2.04□□□□□ -2.08
VPS13YLL040C GIC2Q06648 383 aa2.04□□□□□ -2.08
VPS13YLL040C FCF2Q12035 217 aaPredicted RBP2.04□□□□□ -2.08
VPS13YLL040C HEM4P06174 275 aa2.04□□□□□ -2.08
VPS13YLL040C RPL30P14120 105 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C IMG2P25642 146 aaPredicted RBP2.04□□□□□ -2.08
VPS13YLL040C YIR035CP40579 254 aa2.04□□□□□ -2.08
VPS13YLL040C TAX4P47030 604 aa2.04□□□□□ -2.08
VPS13YLL040C TPC1P53257 314 aa2.04□□□□□ -2.08
VPS13YLL040C RRS1Q08746 203 aaKnown RBP2.04□□□□□ -2.08
VPS13YLL040C AGC1Q12482 902 aa2.04□□□□□ -2.08
VPS13YLL040C DOG1P38774 246 aa2.03□□□□□ -2.08
VPS13YLL040C RPA43P46669 326 aa2.03□□□□□ -2.08
VPS13YLL040C MRPL28P36527 147 aa2.03□□□□□ -2.08
VPS13YLL040C CFD1P40558 293 aa2.03□□□□□ -2.08
VPS13YLL040C TRM9P49957 279 aa2.03□□□□□ -2.08
VPS13YLL040C HCH1P53834 153 aa2.03□□□□□ -2.08
VPS13YLL040C YGR269WP40326 108 aa2.03□□□□□ -2.08
VPS13YLL040C YGL118CP53132 145 aa2.03□□□□□ -2.08
VPS13YLL040C YML079WQ03629 201 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms