RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W BBP1Q12365 385 aa2.41□□□□□ -2.02
VMA5YKL080W Q0255P03881 472 aa2.4□□□□□ -2.03
VMA5YKL080W HIS3P06633 220 aa2.4□□□□□ -2.03
VMA5YKL080W YPR170W-BP0C5R9 85 aa2.4□□□□□ -2.03
VMA5YKL080W YCR090CP25654 182 aaKnown RBP2.4□□□□□ -2.03
VMA5YKL080W BUB2P26448 306 aaPredicted RBP2.4□□□□□ -2.03
VMA5YKL080W SEC17P32602 292 aa2.4□□□□□ -2.03
VMA5YKL080W NUF2P33895 451 aa2.4□□□□□ -2.03
VMA5YKL080W YER076CP40049 302 aa2.4□□□□□ -2.03
VMA5YKL080W DSK2P48510 373 aa2.4□□□□□ -2.03
VMA5YKL080W YGL088WP53151 121 aa2.4□□□□□ -2.03
VMA5YKL080W NQM1P53228 333 aaPredicted RBP2.4□□□□□ -2.03
VMA5YKL080W YDR249CQ03787 373 aa2.4□□□□□ -2.03
VMA5YKL080W GPI17Q04080 534 aa2.4□□□□□ -2.03
VMA5YKL080W HNT1Q04344 158 aaKnown RBP2.4□□□□□ -2.03
VMA5YKL080W YLR179CQ06252 201 aaKnown RBP2.4□□□□□ -2.03
VMA5YKL080W YOL160WQ08321 113 aa2.4□□□□□ -2.03
VMA5YKL080W DGA1Q08650 418 aa2.4□□□□□ -2.03
VMA5YKL080W YPL162CQ12042 273 aa2.4□□□□□ -2.03
VMA5YKL080W PSF1Q12488 208 aa2.4□□□□□ -2.03
VMA5YKL080W TSC3Q3E790 80 aa2.4□□□□□ -2.03
VMA5YKL080W SAS5Q99314 248 aa2.4□□□□□ -2.03
VMA5YKL080W PET20Q99373 253 aa2.4□□□□□ -2.03
VMA5YKL080W PAN1P32521 1480 aa2.39□□□□□ -2.03
VMA5YKL080W YHR139C-AO13536 103 aa2.39□□□□□ -2.03
VMA5YKL080W CDC8P00572 216 aa2.39□□□□□ -2.03
VMA5YKL080W REP2P03872 296 aa2.39□□□□□ -2.03
VMA5YKL080W PET9P18239 318 aaKnown RBP2.39□□□□□ -2.03
VMA5YKL080W VMA11P32842 164 aa2.39□□□□□ -2.03
VMA5YKL080W YHR125WP38831 101 aa2.39□□□□□ -2.03
VMA5YKL080W GIM4P40005 111 aaKnown RBP2.39□□□□□ -2.03
VMA5YKL080W MRPL49P40858 161 aaPredicted RBP2.39□□□□□ -2.03
VMA5YKL080W ARP3P47117 449 aaKnown RBP2.39□□□□□ -2.03
VMA5YKL080W ARO8P53090 500 aaKnown RBP2.39□□□□□ -2.03
VMA5YKL080W YHR214C-EQ8TGK0 99 aa2.39□□□□□ -2.03
VMA5YKL080W YLR156WP0CE96 114 aa2.38□□□□□ -2.03
VMA5YKL080W YLR159WP0CE97 114 aa2.38□□□□□ -2.03
VMA5YKL080W YLR161WP0CE98 114 aa2.38□□□□□ -2.03
VMA5YKL080W SCO1P23833 295 aa2.38□□□□□ -2.03
VMA5YKL080W YKL102CP34249 101 aa2.38□□□□□ -2.03
VMA5YKL080W KDX1P36005 433 aa2.38□□□□□ -2.03
VMA5YKL080W YGR042WP53227 271 aa2.38□□□□□ -2.03
VMA5YKL080W SWP1Q02795 286 aa2.38□□□□□ -2.03
VMA5YKL080W GAS3Q03655 524 aa2.38□□□□□ -2.03
VMA5YKL080W YDR114CQ04597 100 aa2.38□□□□□ -2.03
VMA5YKL080W AKR2Q12013 749 aa2.38□□□□□ -2.03
VMA5YKL080W YLR412C-AQ3E742 68 aa2.38□□□□□ -2.03
VMA5YKL080W RAD10P06838 210 aa2.37□□□□□ -2.03
VMA5YKL080W PET54P10834 293 aa2.37□□□□□ -2.03
VMA5YKL080W IDP1P21954 428 aaKnown RBP2.37□□□□□ -2.03
VMA5YKL080W SPO13P23624 291 aa2.37□□□□□ -2.03
VMA5YKL080W SNC2P33328 115 aa2.37□□□□□ -2.03
VMA5YKL080W AVT2P39981 480 aa2.37□□□□□ -2.03
VMA5YKL080W YER134CP40081 178 aa2.37□□□□□ -2.03
VMA5YKL080W RFC2P40348 353 aa2.37□□□□□ -2.03
VMA5YKL080W GRX5Q02784 150 aa2.37□□□□□ -2.03
VMA5YKL080W YDC1Q02896 317 aa2.37□□□□□ -2.03
VMA5YKL080W RAV2Q03956 351 aa2.37□□□□□ -2.03
VMA5YKL080W MCP1Q12106 302 aa2.37□□□□□ -2.03
VMA5YKL080W YOR342CQ12182 319 aa2.37□□□□□ -2.03
VMA5YKL080W CPA1P07258 411 aaKnown RBP2.36□□□□□ -2.03
VMA5YKL080W RSA4P25382 515 aaKnown RBP2.36□□□□□ -2.03
VMA5YKL080W RPC19P28000 142 aaKnown RBP2.36□□□□□ -2.03
VMA5YKL080W MDH3P32419 343 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
VMA5YKL080W SCM4P32564 187 aa2.36□□□□□ -2.03
VMA5YKL080W UPS2P35200 230 aa2.36□□□□□ -2.03
VMA5YKL080W YKR032WP36127 104 aa2.36□□□□□ -2.03
VMA5YKL080W UTP30P36144 274 aaKnown RBP2.36□□□□□ -2.03
VMA5YKL080W NSG1P38837 291 aa2.36□□□□□ -2.03
VMA5YKL080W MNN5P46982 586 aa2.36□□□□□ -2.03
VMA5YKL080W YGL101WP53144 215 aa2.36□□□□□ -2.03
VMA5YKL080W TIM13P53299 105 aa2.36□□□□□ -2.03
VMA5YKL080W RSM10Q03201 203 aa2.36□□□□□ -2.03
VMA5YKL080W SPG3Q04398 127 aaPredicted RBP2.36□□□□□ -2.03
VMA5YKL080W YDL180WQ12301 547 aa2.36□□□□□ -2.03
VMA5YKL080W YFR032C-BQ8TGU2 87 aa2.36□□□□□ -2.03
VMA5YKL080W ODC2Q99297 307 aa2.36□□□□□ -2.03
VMA5YKL080W TAF2P23255 1407 aa2.35□□□□□ -2.03
VMA5YKL080W FMP23P38231 175 aa2.35□□□□□ -2.03
VMA5YKL080W UMP1P38293 148 aa2.35□□□□□ -2.03
VMA5YKL080W ICE2P40499 491 aa2.35□□□□□ -2.03
VMA5YKL080W SER2P42941 309 aa2.35□□□□□ -2.03
VMA5YKL080W GON7P46984 123 aa2.35□□□□□ -2.03
VMA5YKL080W SNX4P47057 423 aa2.35□□□□□ -2.03
VMA5YKL080W RBL2P48606 106 aaKnown RBP2.35□□□□□ -2.03
VMA5YKL080W TRM12Q04235 462 aa2.35□□□□□ -2.03
VMA5YKL080W YPR127WQ06494 345 aa2.35□□□□□ -2.03
VMA5YKL080W YPD1Q07688 167 aa2.35□□□□□ -2.03
VMA5YKL080W YLR046CQ12253 270 aa2.35□□□□□ -2.03
VMA5YKL080W MSW1P04803 379 aa2.34□□□□□ -2.03
VMA5YKL080W OCH1P31755 480 aa2.34□□□□□ -2.03
VMA5YKL080W YHL026CP38740 315 aa2.34□□□□□ -2.03
VMA5YKL080W YEA4P40004 342 aa2.34□□□□□ -2.03
VMA5YKL080W YIL059CP40520 121 aa2.34□□□□□ -2.03
VMA5YKL080W GVP36P40531 326 aaKnown RBP2.34□□□□□ -2.03
VMA5YKL080W YGL204CP53089 101 aa2.34□□□□□ -2.03
VMA5YKL080W HSK3P69852 69 aa2.34□□□□□ -2.03
VMA5YKL080W TIM9O74700 87 aa2.33□□□□□ -2.04
VMA5YKL080W SHE2P36068 246 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
VMA5YKL080W MRPL17P36528 281 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms