RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W YAR068WP39564 161 aa2.94□□□□□ -1.94
UBP12YJL197W YDL180WQ12301 547 aa2.94□□□□□ -1.94
UBP12YJL197W UBI4P0CG63 381 aaKnown RBP2.94□□□□□ -1.94
UBP12YJL197W UTP30P36144 274 aaKnown RBP2.94□□□□□ -1.94
UBP12YJL197W MSA2P36157 363 aa2.94□□□□□ -1.94
UBP12YJL197W APQ12P40532 138 aa2.94□□□□□ -1.94
UBP12YJL197W NUP157P40064 1391 aaKnown RBP2.94□□□□□ -1.94
UBP12YJL197W ECM5Q03214 1411 aa2.94□□□□□ -1.94
UBP12YJL197W SGA1P08019 549 aa2.94□□□□□ -1.94
UBP12YJL197W RPB3P16370 318 aaKnown RBP2.94□□□□□ -1.94
UBP12YJL197W SWD3P38123 315 aa2.94□□□□□ -1.94
UBP12YJL197W YEA4P40004 342 aa2.94□□□□□ -1.94
UBP12YJL197W TIF34P40217 347 aaKnown RBP2.94□□□□□ -1.94
UBP12YJL197W LSM3P57743 89 aaKnown RBP2.94□□□□□ -1.94
UBP12YJL197W GAS3Q03655 524 aa2.94□□□□□ -1.94
UBP12YJL197W MRX8Q05473 314 aa2.94□□□□□ -1.94
UBP12YJL197W BET1P22804 142 aa2.93□□□□□ -1.94
UBP12YJL197W PRE7P23724 241 aaKnown RBP2.93□□□□□ -1.94
UBP12YJL197W TKL2P33315 681 aa2.93□□□□□ -1.94
UBP12YJL197W YPI1P43587 155 aa2.93□□□□□ -1.94
UBP12YJL197W YPR170W-BP0C5R9 85 aa2.93□□□□□ -1.94
UBP12YJL197W URA5P13298 226 aaKnown RBP2.93□□□□□ -1.94
UBP12YJL197W FMP46P36141 133 aaKnown RBP2.93□□□□□ -1.94
UBP12YJL197W KRE9P39005 276 aa2.93□□□□□ -1.94
UBP12YJL197W AIM2P39721 246 aa2.93□□□□□ -1.94
UBP12YJL197W RFC2P40348 353 aa2.93□□□□□ -1.94
UBP12YJL197W PRR2Q12310 699 aa2.93□□□□□ -1.94
UBP12YJL197W ATP14Q12349 124 aa2.93□□□□□ -1.94
UBP12YJL197W YLR361C-AQ3E795 98 aa2.93□□□□□ -1.94
UBP12YJL197W CKS1P20486 150 aaKnown RBP2.92□□□□□ -1.94
UBP12YJL197W YGP1P38616 354 aaKnown RBP2.92□□□□□ -1.94
UBP12YJL197W SDT1P53078 280 aa2.92□□□□□ -1.94
UBP12YJL197W YOL019WQ08157 551 aa2.92□□□□□ -1.94
UBP12YJL197W PDR18P53756 1333 aa2.92□□□□□ -1.94
UBP12YJL197W PEX34P25584 144 aa2.92□□□□□ -1.94
UBP12YJL197W RCN1P36054 211 aa2.92□□□□□ -1.94
UBP12YJL197W SNX4P47057 423 aa2.92□□□□□ -1.94
UBP12YJL197W RCF2P53721 224 aa2.92□□□□□ -1.94
UBP12YJL197W HHT1P61830 136 aa2.92□□□□□ -1.94
UBP12YJL197W YPR202WQ08993 238 aa2.92□□□□□ -1.94
UBP12YJL197W YOR342CQ12182 319 aa2.92□□□□□ -1.94
UBP12YJL197W PST2Q12335 198 aaKnown RBP2.92□□□□□ -1.94
UBP12YJL197W MDS3P53094 1487 aa2.92□□□□□ -1.94
UBP12YJL197W COX10P21592 462 aa2.92□□□□□ -1.94
UBP12YJL197W TOM40P23644 387 aaKnown RBP2.92□□□□□ -1.94
UBP12YJL197W LDB16P25587 256 aa2.92□□□□□ -1.94
UBP12YJL197W SUA7P29055 345 aaPredicted RBP2.92□□□□□ -1.94
UBP12YJL197W DLS1P40366 167 aa2.92□□□□□ -1.94
UBP12YJL197W YJR111CP47148 283 aaKnown RBP2.92□□□□□ -1.94
UBP12YJL197W RFU1Q08003 200 aa2.92□□□□□ -1.94
UBP12YJL197W YFR032C-BQ8TGU2 87 aa2.92□□□□□ -1.94
UBP12YJL197W IRC20Q06554 1556 aa2.92□□□□□ -1.94
UBP12YJL197W PAN1P32521 1480 aa2.92□□□□□ -1.94
UBP12YJL197W AKR2Q12013 749 aa2.91□□□□□ -1.94
UBP12YJL197W MCP1Q12106 302 aa2.91□□□□□ -1.94
UBP12YJL197W PSF1Q12488 208 aa2.91□□□□□ -1.94
UBP12YJL197W YLR412C-AQ3E742 68 aa2.91□□□□□ -1.94
UBP12YJL197W DNF1P32660 1571 aa2.91□□□□□ -1.94
UBP12YJL197W SSK2P53599 1579 aa2.91□□□□□ -1.94
UBP12YJL197W REP2P03872 296 aa2.91□□□□□ -1.94
UBP12YJL197W SCL1P21243 252 aaKnown RBP2.91□□□□□ -1.94
UBP12YJL197W PGU1P47180 361 aa2.91□□□□□ -1.94
UBP12YJL197W YPD1Q07688 167 aa2.91□□□□□ -1.94
UBP12YJL197W RAD50P12753 1312 aa2.91□□□□□ -1.94
UBP12YJL197W BUD13P46947 266 aaPredicted RBP2.91□□□□□ -1.94
UBP12YJL197W OST2P46964 130 aa2.91□□□□□ -1.94
UBP12YJL197W TTI2P47168 421 aa2.91□□□□□ -1.94
UBP12YJL197W UBC7Q02159 165 aa2.91□□□□□ -1.94
UBP12YJL197W GEP5Q12393 293 aa2.91□□□□□ -1.94
UBP12YJL197W WIP1Q2V2P8 89 aa2.91□□□□□ -1.94
UBP12YJL197W CDC8P00572 216 aa2.9□□□□□ -1.94
UBP12YJL197W RPL2AP0CX45 254 aaKnown RBP2.9□□□□□ -1.94
UBP12YJL197W RPL2BP0CX46 254 aaKnown RBP2.9□□□□□ -1.94
UBP12YJL197W STP22P25604 385 aa2.9□□□□□ -1.94
UBP12YJL197W NSG1P38837 291 aa2.9□□□□□ -1.94
UBP12YJL197W CCC1P47818 322 aa2.9□□□□□ -1.94
UBP12YJL197W SMD1Q02260 146 aaPredicted RBP2.9□□□□□ -1.94
UBP12YJL197W THI74Q04083 370 aa2.9□□□□□ -1.94
UBP12YJL197W HRD1Q08109 551 aa2.9□□□□□ -1.94
UBP12YJL197W YMR230W-AQ3E7B5 62 aa2.9□□□□□ -1.94
UBP12YJL197W YLR156WP0CE96 114 aa2.9□□□□□ -1.94
UBP12YJL197W YLR159WP0CE97 114 aa2.9□□□□□ -1.94
UBP12YJL197W YLR161WP0CE98 114 aa2.9□□□□□ -1.94
UBP12YJL197W CCA1P21269 546 aa2.9□□□□□ -1.94
UBP12YJL197W OCH1P31755 480 aa2.9□□□□□ -1.94
UBP12YJL197W MRPS16Q02608 121 aa2.9□□□□□ -1.94
UBP12YJL197W DGK1Q12382 290 aa2.9□□□□□ -1.94
UBP12YJL197W AVT2P39981 480 aa2.9□□□□□ -1.95
UBP12YJL197W MEP2P41948 499 aa2.9□□□□□ -1.95
UBP12YJL197W APJ1P53940 528 aa2.9□□□□□ -1.95
UBP12YJL197W RSM10Q03201 203 aa2.9□□□□□ -1.95
UBP12YJL197W YMR320WQ04897 101 aa2.9□□□□□ -1.95
UBP12YJL197W YBR285WP38354 144 aa2.89□□□□□ -1.95
UBP12YJL197W GPI14P47088 403 aaKnown RBP2.89□□□□□ -1.95
UBP12YJL197W YJR015WP47090 510 aa2.89□□□□□ -1.95
UBP12YJL197W DAS2Q12084 232 aa2.89□□□□□ -1.95
UBP12YJL197W BUD4P47136 1447 aa2.89□□□□□ -1.95
UBP12YJL197W Q0255P03881 472 aa2.89□□□□□ -1.95
UBP12YJL197W RPL9AP05738 191 aaKnown RBP2.89□□□□□ -1.95
UBP12YJL197W PRS3P38689 320 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms