RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W YFR032C-BQ8TGU2 87 aa1.34□□□□□ -2.19
RPL40AYIL148W RPB3P16370 318 aaKnown RBP1.33□□□□□ -2.2
RPL40AYIL148W YCR090CP25654 182 aaKnown RBP1.33□□□□□ -2.2
RPL40AYIL148W UTP30P36144 274 aaKnown RBP1.33□□□□□ -2.2
RPL40AYIL148W YBR285WP38354 144 aa1.33□□□□□ -2.2
RPL40AYIL148W SVP26P38869 228 aa1.33□□□□□ -2.2
RPL40AYIL148W LSM4P40070 187 aaKnown RBP1.33□□□□□ -2.2
RPL40AYIL148W NOP19P53317 196 aaPredicted RBP1.33□□□□□ -2.2
RPL40AYIL148W YDR274CP87283 123 aa1.33□□□□□ -2.2
RPL40AYIL148W YDR249CQ03787 373 aa1.33□□□□□ -2.2
RPL40AYIL148W HNT1Q04344 158 aaKnown RBP1.33□□□□□ -2.2
RPL40AYIL148W ATG38Q05789 226 aaKnown RBP1.33□□□□□ -2.2
RPL40AYIL148W GPM2Q12008 311 aa1.33□□□□□ -2.2
RPL40AYIL148W MCP1Q12106 302 aa1.33□□□□□ -2.2
RPL40AYIL148W IGO2Q9P305 131 aa1.33□□□□□ -2.2
RPL40AYIL148W SAC3P46674 1301 aa1.33□□□□□ -2.2
RPL40AYIL148W QCR7P00128 127 aa1.32□□□□□ -2.2
RPL40AYIL148W ECM4P36156 370 aa1.32□□□□□ -2.2
RPL40AYIL148W YBR209WP38311 105 aa1.32□□□□□ -2.2
RPL40AYIL148W PDS1P40316 373 aaPredicted RBP1.32□□□□□ -2.2
RPL40AYIL148W BAT2P47176 376 aaKnown RBP1.32□□□□□ -2.2
RPL40AYIL148W PET191Q02772 108 aa1.32□□□□□ -2.2
RPL40AYIL148W GRX3Q03835 250 aa1.32□□□□□ -2.2
RPL40AYIL148W SML1Q04964 104 aa1.32□□□□□ -2.2
RPL40AYIL148W YLR036CQ07986 203 aa1.32□□□□□ -2.2
RPL40AYIL148W JIP3O13555 125 aa1.31□□□□□ -2.2
RPL40AYIL148W MBF1O14467 151 aaKnown RBP1.31□□□□□ -2.2
RPL40AYIL148W RAS2P01120 322 aaKnown RBP1.31□□□□□ -2.2
RPL40AYIL148W MRS1P07266 363 aa1.31□□□□□ -2.2
RPL40AYIL148W DDI2P0CH63 225 aa1.31□□□□□ -2.2
RPL40AYIL148W DDI3P0CH64 225 aa1.31□□□□□ -2.2
RPL40AYIL148W TRX3P25372 127 aa1.31□□□□□ -2.2
RPL40AYIL148W TFC1P32367 649 aa1.31□□□□□ -2.2
RPL40AYIL148W SEC17P32602 292 aa1.31□□□□□ -2.2
RPL40AYIL148W FZF1P32805 299 aa1.31□□□□□ -2.2
RPL40AYIL148W TVP23P38962 199 aa1.31□□□□□ -2.2
RPL40AYIL148W FCY21P40039 528 aa1.31□□□□□ -2.2
RPL40AYIL148W DOC1P53068 250 aa1.31□□□□□ -2.2
RPL40AYIL148W BOL2P53082 120 aa1.31□□□□□ -2.2
RPL40AYIL148W YET3Q07451 203 aa1.31□□□□□ -2.2
RPL40AYIL148W YLR031WQ07978 186 aa1.31□□□□□ -2.2
RPL40AYIL148W YNG1Q08465 219 aa1.31□□□□□ -2.2
RPL40AYIL148W YDL085C-AQ3E7B7 68 aaKnown RBP1.31□□□□□ -2.2
RPL40AYIL148W CPA1P07258 411 aaKnown RBP1.3□□□□□ -2.2
RPL40AYIL148W SNF4P12904 322 aa1.3□□□□□ -2.2
RPL40AYIL148W SHG1P38337 142 aa1.3□□□□□ -2.2
RPL40AYIL148W TMA22P47089 198 aaPredicted RBP1.3□□□□□ -2.2
RPL40AYIL148W YNR077CP53758 84 aa1.3□□□□□ -2.2
RPL40AYIL148W DGA1Q08650 418 aa1.3□□□□□ -2.2
RPL40AYIL148W FSF1Q12029 327 aaKnown RBP1.3□□□□□ -2.2
RPL40AYIL148W RIO1Q12196 484 aaKnown RBP1.3□□□□□ -2.2
RPL40AYIL148W FLO9P39712 1322 aa1.3□□□□□ -2.2
RPL40AYIL148W TAH1P25638 111 aaPredicted RBP1.29□□□□□ -2.2
RPL40AYIL148W ATP7P30902 174 aa1.29□□□□□ -2.2
RPL40AYIL148W ASF2P32448 525 aaPredicted RBP1.29□□□□□ -2.2
RPL40AYIL148W GAA1P39012 614 aa1.29□□□□□ -2.2
RPL40AYIL148W SEC72P39742 193 aaKnown RBP1.29□□□□□ -2.2
RPL40AYIL148W AVT2P39981 480 aa1.29□□□□□ -2.2
RPL40AYIL148W YMR295CQ03559 197 aa1.29□□□□□ -2.2
RPL40AYIL148W CUE4Q04201 117 aaPredicted RBP1.29□□□□□ -2.2
RPL40AYIL148W YOL024WQ08172 172 aa1.29□□□□□ -2.2
RPL40AYIL148W YPR014CQ6B0W2 109 aa1.29□□□□□ -2.2
RPL40AYIL148W YCL012CQ8J0M4 134 aa1.29□□□□□ -2.2
RPL40AYIL148W YOL162WP0CF19 215 aa1.28□□□□□ -2.2
RPL40AYIL148W ATP15P21306 62 aa1.28□□□□□ -2.2
RPL40AYIL148W TMA19P35691 167 aaKnown RBP1.28□□□□□ -2.2
RPL40AYIL148W SHE2P36068 246 aaKnown RBP RIP-Chip data1.28□□□□□ -2.2not detected
RPL40AYIL148W YBR219CP38317 127 aa1.28□□□□□ -2.2
RPL40AYIL148W ERJ5P43613 295 aaPredicted RBP1.28□□□□□ -2.2
RPL40AYIL148W NUP49Q02199 472 aa1.28□□□□□ -2.2
RPL40AYIL148W DYN3Q04949 312 aa1.28□□□□□ -2.2
RPL40AYIL148W NOC4Q06512 552 aaPredicted RBP1.28□□□□□ -2.2
RPL40AYIL148W ODC2Q99297 307 aa1.28□□□□□ -2.2
RPL40AYIL148W ATG40Q99325 256 aa1.28□□□□□ -2.2
RPL40AYIL148W RPS24AP0CX31 135 aaKnown RBP1.27□□□□□ -2.21
RPL40AYIL148W RPS24BP0CX32 135 aaKnown RBP1.27□□□□□ -2.21
RPL40AYIL148W CNB1P25296 175 aa1.27□□□□□ -2.21
RPL40AYIL148W PAN3P36102 679 aaPredicted RBP1.27□□□□□ -2.21
RPL40AYIL148W YER134CP40081 178 aa1.27□□□□□ -2.21
RPL40AYIL148W ARP3P47117 449 aaKnown RBP1.27□□□□□ -2.21
RPL40AYIL148W YNL184CP53876 108 aa1.27□□□□□ -2.21
RPL40AYIL148W ANT1Q06497 328 aa1.27□□□□□ -2.21
RPL40AYIL148W YDL180WQ12301 547 aa1.27□□□□□ -2.21
RPL40AYIL148W YML100W-AQ8TGT0 57 aa1.27□□□□□ -2.21
RPL40AYIL148W PDR18P53756 1333 aa1.26□□□□□ -2.21
RPL40AYIL148W YLR236CA0A023PZG4 107 aa1.26□□□□□ -2.21
RPL40AYIL148W OCH1P31755 480 aa1.26□□□□□ -2.21
RPL40AYIL148W KDX1P36005 433 aa1.26□□□□□ -2.21
RPL40AYIL148W YKR045CP36138 183 aa1.26□□□□□ -2.21
RPL40AYIL148W OPY1P38271 328 aa1.26□□□□□ -2.21
RPL40AYIL148W MTW1P39731 289 aa1.26□□□□□ -2.21
RPL40AYIL148W YEA4P40004 342 aa1.26□□□□□ -2.21
RPL40AYIL148W ERG10P41338 398 aaKnown RBP1.26□□□□□ -2.21
RPL40AYIL148W SER2P42941 309 aa1.26□□□□□ -2.21
RPL40AYIL148W ARO8P53090 500 aaKnown RBP1.26□□□□□ -2.21
RPL40AYIL148W AIM34Q03673 198 aa1.26□□□□□ -2.21
RPL40AYIL148W RAD28Q12021 506 aa1.26□□□□□ -2.21
RPL40AYIL148W QCR8P08525 94 aa1.25□□□□□ -2.21
RPL40AYIL148W APA2P22108 325 aa1.25□□□□□ -2.21
RPL40AYIL148W SEC14P24280 304 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms