RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	YKL102C	P34249	101 aa		2.18	□□□□□ -2.06
VHR1	YIL056W	POP4	P38336	279 aa		2.18	□□□□□ -2.06
VHR1	YIL056W	YEA4	P40004	342 aa		2.18	□□□□□ -2.06
VHR1	YIL056W	HMF1	P40037	129 aa	Known RBP	2.18	□□□□□ -2.06
VHR1	YIL056W	SDS23	P53172	527 aa		2.18	□□□□□ -2.06
VHR1	YIL056W	LSM3	P57743	89 aa	Known RBP	2.18	□□□□□ -2.06
VHR1	YIL056W	PRP11	Q07350	266 aa	Predicted RBP	2.18	□□□□□ -2.06
VHR1	YIL056W	DGA1	Q08650	418 aa		2.18	□□□□□ -2.06
VHR1	YIL056W	IPP1	P00817	287 aa	Known RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	RPS1B	P23248	255 aa	Known RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	MRP49	P32388	137 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	POP8	P38208	133 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YHI9	P38765	294 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	FCY21	P40039	528 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	PGD1	P40356	397 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	APQ12	P40532	138 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	ERJ5	P43613	295 aa	Predicted RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	SOL1	P50278	321 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YGL101W	P53144	215 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YGR050C	P53231	118 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YPL113C	Q02961	396 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	INP1	Q03694	420 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YDR278C	Q05612	105 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YPR195C	Q06594	109 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	PRR2	Q12310	699 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	ATP14	Q12349	124 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	NUP157	P40064	1391 aa	Known RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	PDR18	P53756	1333 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	CDC7	P06243	507 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	MAG1	P22134	296 aa	Known RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	CNB1	P25296	175 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	BUD23	P25627	275 aa	Predicted RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	EDC2	P40023	145 aa	Predicted RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	CAT5	P41735	233 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	MNN5	P46982	586 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	MDM34	P53083	459 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YNL010W	P53981	241 aa	Known RBP	2.17	□□□□□ -2.06
VHR1	YIL056W	YPL278C	Q08990	100 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YOR342C	Q12182	319 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YPS3	Q12303	508 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YIR021W-A	Q3E739	70 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	YBL112C	Q3E7Y4	105 aa		2.17	□□□□□ -2.06
VHR1	YIL056W	MBF1	O14467	151 aa	Known RBP	2.16	□□□□□ -2.06
VHR1	YIL056W	SPO13	P23624	291 aa		2.16	□□□□□ -2.06
VHR1	YIL056W	LHP1	P33399	275 aa	Known RBP	2.16	□□□□□ -2.06
VHR1	YIL056W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.16	□□□□□ -2.06	not detected
VHR1	YIL056W	MRPL24	P36525	258 aa	Predicted RBP	2.16	□□□□□ -2.06
VHR1	YIL056W	YHL044W	P38727	235 aa		2.16	□□□□□ -2.06
VHR1	YIL056W	VMA7	P39111	118 aa		2.16	□□□□□ -2.06
VHR1	YIL056W	ARP3	P47117	449 aa	Known RBP	2.16	□□□□□ -2.06
VHR1	YIL056W	ILM1	P47155	203 aa		2.16	□□□□□ -2.06
VHR1	YIL056W	ARO8	P53090	500 aa	Known RBP	2.16	□□□□□ -2.06
VHR1	YIL056W	HHT1	P61830	136 aa		2.16	□□□□□ -2.06
VHR1	YIL056W	MPD1	Q12404	318 aa	Known RBP	2.16	□□□□□ -2.06
VHR1	YIL056W	YBL008W-A	Q3E821	79 aa		2.16	□□□□□ -2.06
VHR1	YIL056W	STP22	P25604	385 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	IMP1	P28627	190 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	MRPL17	P36528	281 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	RFC2	P40348	353 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	BUD13	P46947	266 aa	Predicted RBP	2.15	□□□□□ -2.06
VHR1	YIL056W	ORM1	P53224	222 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	FMP48	P53233	369 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	PGA1	P53896	198 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	COF1	Q03048	143 aa	Known RBP	2.15	□□□□□ -2.06
VHR1	YIL056W	NKP2	Q06162	153 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	CNL1	Q06333	122 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	IES3	Q12345	250 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	GEP5	Q12393	293 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	TSC3	Q3E790	80 aa		2.15	□□□□□ -2.06
VHR1	YIL056W	BUD4	P47136	1447 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	TY1B-H	O13535	1793 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	RPL30	P14120	105 aa	Known RBP	2.15	□□□□□ -2.07
VHR1	YIL056W	RPC19	P28000	142 aa	Known RBP	2.15	□□□□□ -2.07
VHR1	YIL056W	RPS20	P38701	121 aa	Known RBP	2.15	□□□□□ -2.07
VHR1	YIL056W	MED6	P38782	295 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	YPL073C	P40323	161 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	YIL054W	P40524	105 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	YIL012W	P40551	113 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	ACT1	P60010	375 aa	Known RBP	2.15	□□□□□ -2.07
VHR1	YIL056W	APS2	Q00381	147 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	CWC27	Q02770	301 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	YDL211C	Q12121	372 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	YAL063C-A	Q3E791	96 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	YIL177C	P40434	1758 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	YJL225C	P40889	1758 aa		2.15	□□□□□ -2.07
VHR1	YIL056W	PET9	P18239	318 aa	Known RBP	2.14	□□□□□ -2.07
VHR1	YIL056W	PRE7	P23724	241 aa	Known RBP	2.14	□□□□□ -2.07
VHR1	YIL056W	RSA4	P25382	515 aa	Known RBP	2.14	□□□□□ -2.07
VHR1	YIL056W	SUI1	P32911	108 aa	Known RBP	2.14	□□□□□ -2.07
VHR1	YIL056W	SFC1	P33303	322 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	PAN3	P36102	679 aa	Predicted RBP	2.14	□□□□□ -2.07
VHR1	YIL056W	CSH1	P38287	376 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	DLS1	P40366	167 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	YIL059C	P40520	121 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	OST2	P46964	130 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	CAB4	P53332	305 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	SLM2	P53955	656 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	THI74	Q04083	370 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	YPR011C	Q12251	326 aa		2.14	□□□□□ -2.07
VHR1	YIL056W	YDL180W	Q12301	547 aa		2.14	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms