RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C RPB3P16370 318 aaKnown RBP1.44□□□□□ -2.18
CUP1-2YHR055C PBN1P25580 416 aa1.44□□□□□ -2.18
CUP1-2YHR055C IRC18P47056 224 aa1.44□□□□□ -2.18
CUP1-2YHR055C RAD28Q12021 506 aa1.44□□□□□ -2.18
CUP1-2YHR055C YFR032C-BQ8TGU2 87 aa1.44□□□□□ -2.18
CUP1-2YHR055C NCB2Q92317 146 aa1.44□□□□□ -2.18
CUP1-2YHR055C STE18P18852 110 aa1.43□□□□□ -2.18
CUP1-2YHR055C YHR007C-AQ07074 71 aa1.43□□□□□ -2.18
CUP1-2YHR055C SEC11P15367 167 aa1.42□□□□□ -2.18
CUP1-2YHR055C CKS1P20486 150 aaKnown RBP1.42□□□□□ -2.18
CUP1-2YHR055C MAG1P22134 296 aaKnown RBP1.42□□□□□ -2.18
CUP1-2YHR055C PRX1P34227 261 aaKnown RBP1.42□□□□□ -2.18
CUP1-2YHR055C CBT1P36038 271 aaPredicted RBP1.42□□□□□ -2.18
CUP1-2YHR055C TRM5P38793 499 aa1.42□□□□□ -2.18
CUP1-2YHR055C YNL194CP40169 301 aa1.42□□□□□ -2.18
CUP1-2YHR055C LSM7P53905 115 aaKnown RBP1.42□□□□□ -2.18
CUP1-2YHR055C RCE1Q03530 315 aa1.42□□□□□ -2.18
CUP1-2YHR055C MDM32Q12171 622 aa1.42□□□□□ -2.18
CUP1-2YHR055C COQ1P18900 473 aa1.41□□□□□ -2.18
CUP1-2YHR055C RAD17P48581 401 aa1.41□□□□□ -2.18
CUP1-2YHR055C ATP15P21306 62 aa1.4□□□□□ -2.19
CUP1-2YHR055C PRP18P33411 251 aaPredicted RBP1.4□□□□□ -2.19
CUP1-2YHR055C ARO8P53090 500 aaKnown RBP1.4□□□□□ -2.19
CUP1-2YHR055C COG5P53951 403 aa1.4□□□□□ -2.19
CUP1-2YHR055C RPL27AP0C2H6 136 aaKnown RBP1.39□□□□□ -2.19
CUP1-2YHR055C ECM4P36156 370 aa1.39□□□□□ -2.19
CUP1-2YHR055C EDC3P39998 551 aaKnown RBP1.39□□□□□ -2.19
CUP1-2YHR055C PET191Q02772 108 aa1.39□□□□□ -2.19
CUP1-2YHR055C YMR007WQ03675 126 aa1.39□□□□□ -2.19
CUP1-2YHR055C ACC1Q00955 2233 aaKnown RBP1.39□□□□□ -2.19
CUP1-2YHR055C TVP23P38962 199 aa1.38□□□□□ -2.19
CUP1-2YHR055C YER034WP40022 185 aaKnown RBP1.38□□□□□ -2.19
CUP1-2YHR055C HMF1P40037 129 aaKnown RBP1.38□□□□□ -2.19
CUP1-2YHR055C FLX1P40464 311 aa1.38□□□□□ -2.19
CUP1-2YHR055C YAE1P47118 141 aaPredicted RBP1.38□□□□□ -2.19
CUP1-2YHR055C RPL37AP49166 88 aaKnown RBP1.38□□□□□ -2.19
CUP1-2YHR055C IKI3Q06706 1349 aaKnown RBP1.38□□□□□ -2.19
CUP1-2YHR055C YDR157WA0A023PZE8 133 aa1.37□□□□□ -2.19
CUP1-2YHR055C MER1P16523 270 aa1.37□□□□□ -2.19
CUP1-2YHR055C KDX1P36005 433 aa1.37□□□□□ -2.19
CUP1-2YHR055C VMA22P38784 181 aa1.37□□□□□ -2.19
CUP1-2YHR055C YEL067CP39978 195 aa1.37□□□□□ -2.19
CUP1-2YHR055C SOK1P40317 901 aa1.37□□□□□ -2.19
CUP1-2YHR055C MSS2P40990 351 aa1.37□□□□□ -2.19
CUP1-2YHR055C CWC23P52868 283 aaPredicted RBP1.37□□□□□ -2.19
CUP1-2YHR055C HNT1Q04344 158 aaKnown RBP1.37□□□□□ -2.19
CUP1-2YHR055C YPR174CQ06616 221 aaPredicted RBP1.37□□□□□ -2.19
CUP1-2YHR055C CDC33P07260 213 aaKnown RBP1.36□□□□□ -2.19
CUP1-2YHR055C SPS18P32572 300 aa1.36□□□□□ -2.19
CUP1-2YHR055C GCN20P43535 752 aaKnown RBP1.36□□□□□ -2.19
CUP1-2YHR055C YNG1Q08465 219 aa1.36□□□□□ -2.19
CUP1-2YHR055C RUD3Q12234 484 aaKnown RBP1.36□□□□□ -2.19
CUP1-2YHR055C YCR087C-AP37263 153 aa1.35□□□□□ -2.19
CUP1-2YHR055C CWC27Q02770 301 aa1.35□□□□□ -2.19
CUP1-2YHR055C YOL160WQ08321 113 aa1.35□□□□□ -2.19
CUP1-2YHR055C ODC2Q99297 307 aa1.35□□□□□ -2.19
CUP1-2YHR055C AQY2P0CD90 149 aa1.34□□□□□ -2.19
CUP1-2YHR055C SPO13P23624 291 aa1.34□□□□□ -2.19
CUP1-2YHR055C YPL073CP40323 161 aa1.34□□□□□ -2.19
CUP1-2YHR055C MDM35O60200 86 aa1.33□□□□□ -2.2
CUP1-2YHR055C NSP1P14907 823 aaKnown RBP1.33□□□□□ -2.2
CUP1-2YHR055C YCR090CP25654 182 aaKnown RBP1.33□□□□□ -2.2
CUP1-2YHR055C YHL042WP38729 150 aa1.33□□□□□ -2.2
CUP1-2YHR055C IKI1P38874 309 aa1.33□□□□□ -2.2
CUP1-2YHR055C GET1P53192 235 aa1.33□□□□□ -2.2
CUP1-2YHR055C YNL247WP53852 767 aaKnown RBP1.33□□□□□ -2.2
CUP1-2YHR055C BNA7Q04066 261 aa1.33□□□□□ -2.2
CUP1-2YHR055C DGA1Q08650 418 aa1.33□□□□□ -2.2
CUP1-2YHR055C POR1P04840 283 aaKnown RBP1.32□□□□□ -2.2
CUP1-2YHR055C PAN3P36102 679 aaPredicted RBP1.32□□□□□ -2.2
CUP1-2YHR055C AIM2P39721 246 aa1.32□□□□□ -2.2
CUP1-2YHR055C HYR1P40581 163 aaKnown RBP1.32□□□□□ -2.2
CUP1-2YHR055C YFL065CP43539 102 aa1.32□□□□□ -2.2
CUP1-2YHR055C AIM25P47140 327 aa1.32□□□□□ -2.2
CUP1-2YHR055C MPC3P53311 146 aa1.32□□□□□ -2.2
CUP1-2YHR055C FAS1P07149 2051 aaKnown RBP1.31□□□□□ -2.2
CUP1-2YHR055C OCH1P31755 480 aa1.31□□□□□ -2.2
CUP1-2YHR055C PGA2P53903 129 aa1.31□□□□□ -2.2
CUP1-2YHR055C FUS2Q05670 677 aa1.31□□□□□ -2.2
CUP1-2YHR055C HUA1P40325 198 aa1.3□□□□□ -2.2
CUP1-2YHR055C YRA1Q12159 226 aaKnown RBP1.3□□□□□ -2.2
CUP1-2YHR055C YHR212W-AP0CX91 67 aa1.29□□□□□ -2.2
CUP1-2YHR055C TAF14P35189 244 aa1.29□□□□□ -2.2
CUP1-2YHR055C ERG10P41338 398 aaKnown RBP1.29□□□□□ -2.2
CUP1-2YHR055C SLH1P53327 1967 aaKnown RBP1.28□□□□□ -2.2
CUP1-2YHR055C YEA4P40004 342 aa1.28□□□□□ -2.2
CUP1-2YHR055C YFH7P43591 353 aa1.28□□□□□ -2.2
CUP1-2YHR055C YMR295CQ03559 197 aa1.28□□□□□ -2.2
CUP1-2YHR055C DYN3Q04949 312 aa1.28□□□□□ -2.2
CUP1-2YHR055C HTB1P02293 131 aaKnown RBP1.27□□□□□ -2.21
CUP1-2YHR055C HTB2P02294 131 aa1.27□□□□□ -2.21
CUP1-2YHR055C ARG80P07249 177 aa1.27□□□□□ -2.21
CUP1-2YHR055C YPK2P18961 677 aa1.27□□□□□ -2.21
CUP1-2YHR055C RFA3P26755 122 aaKnown RBP1.27□□□□□ -2.21
CUP1-2YHR055C RPL37BP51402 88 aaKnown RBP1.27□□□□□ -2.21
CUP1-2YHR055C GIS3Q12418 502 aa1.27□□□□□ -2.21
CUP1-2YHR055C CDC36P06100 191 aaPredicted RBP1.26□□□□□ -2.21
CUP1-2YHR055C CNB1P25296 175 aa1.26□□□□□ -2.21
CUP1-2YHR055C YER134CP40081 178 aa1.26□□□□□ -2.21
CUP1-2YHR055C GGA1Q06336 557 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms