RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeast

Gene SKI6, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI6	YGR195W	YHR214C-E	Q8TGK0	99 aa		4.24	□□□□□ -1.73
SKI6	YGR195W	YPL229W	Q99395	206 aa		4.24	□□□□□ -1.73
SKI6	YGR195W	PHO2	P07269	559 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	MRS3	P10566	314 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	CPR4	P25334	318 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	YCR025C	P25352	136 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	CSG2	P35206	410 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	TRR2	P38816	342 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	PTI1	P39927	425 aa	Predicted RBP	4.23	□□□□□ -1.73
SKI6	YGR195W	YER137C	P40083	148 aa	Known RBP	4.23	□□□□□ -1.73
SKI6	YGR195W	YJR015W	P47090	510 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	BIR1	P47134	954 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	CRH1	P53301	507 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	WSC2	P53832	503 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	RNH201	P53942	307 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	RMI1	Q02685	241 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	GPI17	Q04080	534 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	FRQ1	Q06389	190 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	DGA1	Q08650	418 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	TIR4	Q12218	487 aa	Predicted RBP	4.23	□□□□□ -1.73
SKI6	YGR195W	RPL21B	Q12672	160 aa	Known RBP	4.23	□□□□□ -1.73
SKI6	YGR195W	YPR014C	Q6B0W2	109 aa		4.23	□□□□□ -1.73
SKI6	YGR195W	MBF1	O14467	151 aa	Known RBP	4.22	□□□□□ -1.73
SKI6	YGR195W	HSP30	P25619	332 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	YKL102C	P34249	101 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	FMP46	P36141	133 aa	Known RBP	4.22	□□□□□ -1.73
SKI6	YGR195W	SHE1	P38200	338 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	MED6	P38782	295 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	AST2	P39945	430 aa	Known RBP	4.22	□□□□□ -1.73
SKI6	YGR195W	MNN5	P46982	586 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	YGL101W	P53144	215 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	FMP48	P53233	369 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	HHT1	P61830	136 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	DID2	P69771	204 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	SDH7	Q04401	133 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	YDR278C	Q05612	105 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	YPR202W	Q08993	238 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	ATP14	Q12349	124 aa		4.22	□□□□□ -1.73
SKI6	YGR195W	MPD1	Q12404	318 aa	Known RBP	4.22	□□□□□ -1.73
SKI6	YGR195W	CDC7	P06243	507 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	ATS1	P31386	333 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	YBR285W	P38354	144 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	AVT6	P40074	448 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	YER186C	P40101	306 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	ATG18	P43601	500 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	BNS1	P50084	137 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	YGL262W	P53054	175 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	MDM34	P53083	459 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	YGR050C	P53231	118 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	YNL010W	P53981	241 aa	Known RBP	4.21	□□□□□ -1.74
SKI6	YGR195W	YDR249C	Q03787	373 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	YMR230W-A	Q3E7B5	62 aa		4.21	□□□□□ -1.74
SKI6	YGR195W	RPS1A	P33442	255 aa	Known RBP	4.2	□□□□□ -1.74
SKI6	YGR195W	UTP11	P34247	250 aa	Predicted RBP	4.2	□□□□□ -1.74
SKI6	YGR195W	YBR063C	P38083	404 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	SMP1	P38128	452 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	YEA4	P40004	342 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	YER189W	P40104	122 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	BUD13	P46947	266 aa	Predicted RBP	4.2	□□□□□ -1.74
SKI6	YGR195W	RPE1	P46969	238 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	ALB1	P47019	175 aa	Predicted RBP	4.2	□□□□□ -1.74
SKI6	YGR195W	ELP3	Q02908	557 aa	Known RBP	4.2	□□□□□ -1.74
SKI6	YGR195W	YTH1	Q06102	208 aa	Predicted RBP	4.2	□□□□□ -1.74
SKI6	YGR195W	YPS3	Q12303	508 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	RIB3	Q99258	208 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	HTL1	Q9URQ5	78 aa		4.2	□□□□□ -1.74
SKI6	YGR195W	UBI4	P0CG63	381 aa	Known RBP	4.19	□□□□□ -1.74
SKI6	YGR195W	CNB1	P25296	175 aa		4.19	□□□□□ -1.74
SKI6	YGR195W	CSE2	P33308	149 aa		4.19	□□□□□ -1.74
SKI6	YGR195W	TIF34	P40217	347 aa	Known RBP	4.19	□□□□□ -1.74
SKI6	YGR195W	APQ12	P40532	138 aa		4.19	□□□□□ -1.74
SKI6	YGR195W	SDT1	P53078	280 aa		4.19	□□□□□ -1.74
SKI6	YGR195W	ARO8	P53090	500 aa	Known RBP	4.19	□□□□□ -1.74
SKI6	YGR195W	TIM13	P53299	105 aa		4.19	□□□□□ -1.74
SKI6	YGR195W	SWT21	P53873	357 aa	Predicted RBP	4.19	□□□□□ -1.74
SKI6	YGR195W	PGA1	P53896	198 aa		4.19	□□□□□ -1.74
SKI6	YGR195W	LSM3	P57743	89 aa	Known RBP	4.19	□□□□□ -1.74
SKI6	YGR195W	IZH2	Q12442	317 aa		4.19	□□□□□ -1.74
SKI6	YGR195W	KIN28	P06242	306 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	RPL2A	P0CX45	254 aa	Known RBP	4.18	□□□□□ -1.74
SKI6	YGR195W	RPL2B	P0CX46	254 aa	Known RBP	4.18	□□□□□ -1.74
SKI6	YGR195W	SCL1	P21243	252 aa	Known RBP	4.18	□□□□□ -1.74
SKI6	YGR195W	RPC19	P28000	142 aa	Known RBP	4.18	□□□□□ -1.74
SKI6	YGR195W	COS10	P52924	374 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	UFD1	P53044	361 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	RPL21A	Q02753	160 aa	Known RBP	4.18	□□□□□ -1.74
SKI6	YGR195W	ARL3	Q02804	198 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	TRM12	Q04235	462 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	NEJ1	Q06148	342 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	PRP11	Q07350	266 aa	Predicted RBP	4.18	□□□□□ -1.74
SKI6	YGR195W	IRC25	Q07951	179 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	SLD7	Q08457	257 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	YPR011C	Q12251	326 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	YOR020W-A	Q3E824	90 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	TDA8	Q6B2U8	126 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	PDR18	P53756	1333 aa		4.18	□□□□□ -1.74
SKI6	YGR195W	YHR139C-A	O13536	103 aa		4.17	□□□□□ -1.74
SKI6	YGR195W	SPO13	P23624	291 aa		4.17	□□□□□ -1.74
SKI6	YGR195W	SFK1	P35735	353 aa		4.17	□□□□□ -1.74
SKI6	YGR195W	MRPL24	P36525	258 aa	Predicted RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms