RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W AVO2Q04749 426 aa3.71□□□□□ -1.82
PRE9YGR135W MRPL51Q06090 140 aaPredicted RBP3.71□□□□□ -1.82
PRE9YGR135W HEM25Q07534 307 aa3.71□□□□□ -1.82
PRE9YGR135W MEX67Q99257 599 aaKnown RBP3.71□□□□□ -1.82
PRE9YGR135W PET20Q99373 253 aa3.71□□□□□ -1.82
PRE9YGR135W RPS16AP0CX51 143 aaKnown RBP3.7□□□□□ -1.82
PRE9YGR135W RPS16BP0CX52 143 aaKnown RBP3.7□□□□□ -1.82
PRE9YGR135W MATALPHA1P0CY06 175 aa3.7□□□□□ -1.82
PRE9YGR135W HMLALPHA1P0CY07 175 aa3.7□□□□□ -1.82
PRE9YGR135W URA6P15700 204 aa3.7□□□□□ -1.82
PRE9YGR135W RPB5P20434 215 aa3.7□□□□□ -1.82
PRE9YGR135W MXR2P25566 168 aa3.7□□□□□ -1.82
PRE9YGR135W YCR101CP25607 182 aa3.7□□□□□ -1.82
PRE9YGR135W POP5P28005 173 aa3.7□□□□□ -1.82
PRE9YGR135W MRPL15P36523 253 aa3.7□□□□□ -1.82
PRE9YGR135W POP8P38208 133 aa3.7□□□□□ -1.82
PRE9YGR135W RRP3P38712 501 aaKnown RBP3.7□□□□□ -1.82
PRE9YGR135W SUR2P38992 349 aa3.7□□□□□ -1.82
PRE9YGR135W CCC1P47818 322 aa3.7□□□□□ -1.82
PRE9YGR135W MTM1P53320 366 aa3.7□□□□□ -1.82
PRE9YGR135W MPA43P53583 542 aaPredicted RBP3.7□□□□□ -1.82
PRE9YGR135W TDA7P53882 636 aaPredicted RBP3.7□□□□□ -1.82
PRE9YGR135W CTF19Q02732 369 aa3.7□□□□□ -1.82
PRE9YGR135W ADD37Q03233 198 aa3.7□□□□□ -1.82
PRE9YGR135W ERP1Q05359 219 aaKnown RBP3.7□□□□□ -1.82
PRE9YGR135W YNR034W-AQ3E841 98 aa3.7□□□□□ -1.82
PRE9YGR135W COA6Q3E846 104 aa3.7□□□□□ -1.82
PRE9YGR135W CDC28P00546 298 aaKnown RBP3.69□□□□□ -1.82
PRE9YGR135W PAU19P0CE85 124 aa3.69□□□□□ -1.82
PRE9YGR135W PAU21P0CE86 164 aa3.69□□□□□ -1.82
PRE9YGR135W PAU22P0CE87 164 aa3.69□□□□□ -1.82
PRE9YGR135W PAU3P25610 124 aa3.69□□□□□ -1.82
PRE9YGR135W EHD3P28817 500 aa3.69□□□□□ -1.82
PRE9YGR135W TIM12P32830 109 aa3.69□□□□□ -1.82
PRE9YGR135W MRPS9P38120 278 aa3.69□□□□□ -1.82
PRE9YGR135W RIB5P38145 238 aa3.69□□□□□ -1.82
PRE9YGR135W CHK1P38147 527 aa3.69□□□□□ -1.82
PRE9YGR135W TRS20P38334 175 aa3.69□□□□□ -1.82
PRE9YGR135W TAE1P38340 232 aa3.69□□□□□ -1.82
PRE9YGR135W FLO5P38894 1075 aa3.69□□□□□ -1.82
PRE9YGR135W YEA6P39953 335 aa3.69□□□□□ -1.82
PRE9YGR135W PHS1P40857 217 aa3.69□□□□□ -1.82
PRE9YGR135W CDC40P40968 455 aaPredicted RBP3.69□□□□□ -1.82
PRE9YGR135W SNO3P43544 222 aa3.69□□□□□ -1.82
PRE9YGR135W MOB2P43563 287 aa3.69□□□□□ -1.82
PRE9YGR135W YJL118WP47022 219 aa3.69□□□□□ -1.82
PRE9YGR135W BXI1P48558 297 aa3.69□□□□□ -1.82
PRE9YGR135W SEH1P53011 349 aaKnown RBP3.69□□□□□ -1.82
PRE9YGR135W YDC1Q02896 317 aa3.69□□□□□ -1.82
PRE9YGR135W SRO7Q12038 1033 aa3.69□□□□□ -1.82
PRE9YGR135W YOP1Q12402 180 aa3.69□□□□□ -1.82
PRE9YGR135W AGC1Q12482 902 aa3.69□□□□□ -1.82
PRE9YGR135W YIL134C-AQ45U18 67 aa3.69□□□□□ -1.82
PRE9YGR135W MDM10P18409 493 aa3.68□□□□□ -1.82
PRE9YGR135W ERG1P32476 496 aaKnown RBP3.68□□□□□ -1.82
PRE9YGR135W MRPS5P33759 307 aa3.68□□□□□ -1.82
PRE9YGR135W YOR062CP36025 268 aa3.68□□□□□ -1.82
PRE9YGR135W YEA4P40004 342 aa3.68□□□□□ -1.82
PRE9YGR135W HEM14P40012 539 aa3.68□□□□□ -1.82
PRE9YGR135W IKS1P47042 667 aa3.68□□□□□ -1.82
PRE9YGR135W OST3P48439 350 aa3.68□□□□□ -1.82
PRE9YGR135W UFD1P53044 361 aa3.68□□□□□ -1.82
PRE9YGR135W YGL262WP53054 175 aa3.68□□□□□ -1.82
PRE9YGR135W VEL1P53058 206 aa3.68□□□□□ -1.82
PRE9YGR135W SLX9P53251 210 aaPredicted RBP3.68□□□□□ -1.82
PRE9YGR135W SCW4P53334 386 aaKnown RBP3.68□□□□□ -1.82
PRE9YGR135W YML018CQ03730 393 aa3.68□□□□□ -1.82
PRE9YGR135W GMC1Q04399 608 aa3.68□□□□□ -1.82
PRE9YGR135W RTT103Q05543 409 aa3.68□□□□□ -1.82
PRE9YGR135W BSC6Q08280 497 aa3.68□□□□□ -1.82
PRE9YGR135W FDH1Q08911 376 aa3.68□□□□□ -1.82
PRE9YGR135W SRL2Q12020 392 aa3.68□□□□□ -1.82
PRE9YGR135W YDL009CQ12210 107 aa3.68□□□□□ -1.82
PRE9YGR135W FYV7Q12247 151 aa3.68□□□□□ -1.82
PRE9YGR135W PRP46Q12417 451 aaPredicted RBP3.68□□□□□ -1.82
PRE9YGR135W YPR014CQ6B0W2 109 aa3.68□□□□□ -1.82
PRE9YGR135W QCR2P07257 368 aa3.67□□□□□ -1.82
PRE9YGR135W SGA1P08019 549 aa3.67□□□□□ -1.82
PRE9YGR135W ATP5P09457 212 aa3.67□□□□□ -1.82
PRE9YGR135W RPL31AP0C2H8 113 aaKnown RBP3.67□□□□□ -1.82
PRE9YGR135W MIR1P23641 311 aaKnown RBP3.67□□□□□ -1.82
PRE9YGR135W MDH3P32419 343 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
PRE9YGR135W AGA2P32781 87 aa3.67□□□□□ -1.82
PRE9YGR135W YKL071WP36086 256 aa3.67□□□□□ -1.82
PRE9YGR135W RPL13BP40212 199 aaKnown RBP3.67□□□□□ -1.82
PRE9YGR135W AGE2P40529 298 aa3.67□□□□□ -1.82
PRE9YGR135W GWT1P47026 490 aa3.67□□□□□ -1.82
PRE9YGR135W YNR048WP53740 393 aa3.67□□□□□ -1.82
PRE9YGR135W ALG9P53868 555 aaKnown RBP3.67□□□□□ -1.82
PRE9YGR135W YDR248CQ03786 193 aa3.67□□□□□ -1.82
PRE9YGR135W HNT1Q04344 158 aaKnown RBP3.67□□□□□ -1.82
PRE9YGR135W CTS2Q06350 511 aa3.67□□□□□ -1.82
PRE9YGR135W TIM18Q08749 192 aa3.67□□□□□ -1.82
PRE9YGR135W YOR015WQ12169 119 aa3.67□□□□□ -1.82
PRE9YGR135W YOR114WQ12219 294 aa3.67□□□□□ -1.82
PRE9YGR135W YCT1Q12235 531 aa3.67□□□□□ -1.82
PRE9YGR135W IZH2Q12442 317 aa3.67□□□□□ -1.82
PRE9YGR135W RPL13AQ12690 199 aaPredicted RBP3.67□□□□□ -1.82
PRE9YGR135W YDL085C-AQ3E7B7 68 aaKnown RBP3.67□□□□□ -1.82
PRE9YGR135W UBA3Q99344 299 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms