RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	SPS18	P32572	300 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	PTM1	P32857	523 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	YKR045C	P36138	183 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	SKG1	P36169	355 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	YBR285W	P38354	144 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	AST2	P39945	430 aa	Known RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	RMD6	P39975	231 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	ERG10	P41338	398 aa	Known RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	BNA7	Q04066	261 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	ANT1	Q06497	328 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	YFR032C-B	Q8TGU2	87 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	ATG40	Q99325	256 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	FLO9	P39712	1322 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	RPL25	P04456	142 aa	Known RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	CDC36	P06100	191 aa	Predicted RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	SIR2	P06700	562 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	YKT6	P36015	200 aa	Known RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	RPL13B	P40212	199 aa	Known RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	KNH1	P50112	268 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	CUS2	P53830	285 aa	Predicted RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	NUP49	Q02199	472 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	MZM1	Q03429	123 aa	Predicted RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	GRX3	Q03835	250 aa		0.71	□□□□□ -2.3
SCW11	YGL028C	RPL13A	Q12690	199 aa	Predicted RBP	0.71	□□□□□ -2.3
SCW11	YGL028C	IKI3	Q06706	1349 aa	Known RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	HTB1	P02293	131 aa	Known RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	HTB2	P02294	131 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	CPA1	P07258	411 aa	Known RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	RPL27A	P0C2H6	136 aa	Known RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	FPR1	P20081	114 aa	Known RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	CNB1	P25296	175 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	TFC1	P32367	649 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	ASF2	P32448	525 aa	Predicted RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	KDX1	P36005	433 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	VMA22	P38784	181 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	TRM5	P38793	499 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	HMF1	P40037	129 aa	Known RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	EAF6	P47128	113 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	YDR274C	P87283	123 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	ABP140	Q08641	628 aa	Known RBP	0.7	□□□□□ -2.3
SCW11	YGL028C	ADF1	Q2V2Q1	113 aa		0.7	□□□□□ -2.3
SCW11	YGL028C	YLR236C	A0A023PZG4	107 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	GPA2	P10823	449 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	OCH1	P31755	480 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	YBR209W	P38311	105 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	YER034W	P40022	185 aa	Known RBP	0.69	□□□□□ -2.3
SCW11	YGL028C	MPC3	P53311	146 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	MPA43	P53583	542 aa	Predicted RBP	0.69	□□□□□ -2.3
SCW11	YGL028C	YOL160W	Q08321	113 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	RIO1	Q12196	484 aa	Known RBP	0.69	□□□□□ -2.3
SCW11	YGL028C	ODC2	Q99297	307 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	MET5	P47169	1442 aa		0.69	□□□□□ -2.3
SCW11	YGL028C	MRS1	P07266	363 aa		0.68	□□□□□ -2.3
SCW11	YGL028C	SEC11	P15367	167 aa		0.68	□□□□□ -2.3
SCW11	YGL028C	SPO13	P23624	291 aa		0.68	□□□□□ -2.3
SCW11	YGL028C	OPY1	P38271	328 aa		0.68	□□□□□ -2.3
SCW11	YGL028C	RFC4	P40339	323 aa	Known RBP	0.68	□□□□□ -2.3
SCW11	YGL028C	ERJ5	P43613	295 aa	Predicted RBP	0.68	□□□□□ -2.3
SCW11	YGL028C	SKI6	P46948	246 aa	Predicted RBP	0.68	□□□□□ -2.3
SCW11	YGL028C	AIM25	P47140	327 aa		0.68	□□□□□ -2.3
SCW11	YGL028C	NOP19	P53317	196 aa	Predicted RBP	0.68	□□□□□ -2.3
SCW11	YGL028C	SAY1	P53324	424 aa		0.68	□□□□□ -2.3
SCW11	YGL028C	MRPS17	Q03246	237 aa	Predicted RBP	0.68	□□□□□ -2.3
SCW11	YGL028C	HNT1	Q04344	158 aa	Known RBP	0.68	□□□□□ -2.3
SCW11	YGL028C	YMR226C	Q05016	267 aa	Known RBP	0.68	□□□□□ -2.3
SCW11	YGL028C	QCR7	P00128	127 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	MATALPHA2	P0CY08	210 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	HMLALPHA2	P0CY09	210 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	CKS1	P20486	150 aa	Known RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	ARP3	P47117	449 aa	Known RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	CWC21	Q03375	135 aa	Known RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	GET4	Q12125	312 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	YRA1	Q12159	226 aa	Known RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	MDM32	Q12171	622 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	SLH1	P53327	1967 aa	Known RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	YLR422W	Q06409	1932 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	MBF1	O14467	151 aa	Known RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	POR1	P04840	283 aa	Known RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	QCR8	P08525	94 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	CBF1	P17106	351 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	PHO85	P17157	305 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	FMP23	P38231	175 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	YER076C	P40049	302 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	UBC12	P52491	188 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	MMS2	P53152	137 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	GET1	P53192	235 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	ARO80	Q04052	950 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	CUE4	Q04201	117 aa	Predicted RBP	0.67	□□□□□ -2.3
SCW11	YGL028C	DGA1	Q08650	418 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	RAD28	Q12021	506 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	YDL180W	Q12301	547 aa		0.67	□□□□□ -2.3
SCW11	YGL028C	AQY2	P0CD90	149 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	ADE1	P27616	306 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	PAN3	P36102	679 aa	Predicted RBP	0.66	□□□□□ -2.3
SCW11	YGL028C	TVP38	P36164	337 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	YEA4	P40004	342 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	FLX1	P40464	311 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	SER2	P42941	309 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	CGR1	P53188	120 aa		0.66	□□□□□ -2.3
SCW11	YGL028C	YNL184C	P53876	108 aa		0.66	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 79.3 ms