RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W PDR18P53756 1333 aa1.8□□□□□ -2.12
LSM4YER112W HMF1P40037 129 aaKnown RBP1.79□□□□□ -2.12
LSM4YER112W EAF6P47128 113 aa1.79□□□□□ -2.12
LSM4YER112W COG5P53951 403 aa1.79□□□□□ -2.12
LSM4YER112W YHR214C-EQ8TGK0 99 aa1.79□□□□□ -2.12
LSM4YER112W RPB3P16370 318 aaKnown RBP1.78□□□□□ -2.12
LSM4YER112W MER1P16523 270 aa1.78□□□□□ -2.12
LSM4YER112W FPR1P20081 114 aaKnown RBP1.78□□□□□ -2.12
LSM4YER112W SPS18P32572 300 aa1.78□□□□□ -2.12
LSM4YER112W TAF14P35189 244 aa1.78□□□□□ -2.12
LSM4YER112W HTB1P02293 131 aaKnown RBP1.77□□□□□ -2.13
LSM4YER112W HTB2P02294 131 aa1.77□□□□□ -2.13
LSM4YER112W GPA2P10823 449 aa1.77□□□□□ -2.13
LSM4YER112W CKS1P20486 150 aaKnown RBP1.77□□□□□ -2.13
LSM4YER112W ERJ5P43613 295 aaPredicted RBP1.77□□□□□ -2.13
LSM4YER112W CWC21Q03375 135 aaKnown RBP1.77□□□□□ -2.13
LSM4YER112W RIO1Q12196 484 aaKnown RBP1.77□□□□□ -2.13
LSM4YER112W YFR032C-BQ8TGU2 87 aa1.77□□□□□ -2.13
LSM4YER112W RPL2AP0CX45 254 aaKnown RBP1.76□□□□□ -2.13
LSM4YER112W RPL2BP0CX46 254 aaKnown RBP1.76□□□□□ -2.13
LSM4YER112W RFA3P26755 122 aaKnown RBP1.76□□□□□ -2.13
LSM4YER112W UPS2P35200 230 aa1.76□□□□□ -2.13
LSM4YER112W RFC4P40339 323 aaKnown RBP1.76□□□□□ -2.13
LSM4YER112W CUS2P53830 285 aaPredicted RBP1.76□□□□□ -2.13
LSM4YER112W PET191Q02772 108 aa1.76□□□□□ -2.13
LSM4YER112W YRA1Q12159 226 aaKnown RBP1.76□□□□□ -2.13
LSM4YER112W IKI3Q06706 1349 aaKnown RBP1.75□□□□□ -2.13
LSM4YER112W YKT6P36015 200 aaKnown RBP1.75□□□□□ -2.13
LSM4YER112W TVP38P36164 337 aa1.75□□□□□ -2.13
LSM4YER112W GLE2P40066 365 aa1.75□□□□□ -2.13
LSM4YER112W CGR1P53188 120 aa1.75□□□□□ -2.13
LSM4YER112W POP3P53833 195 aaPredicted RBP1.75□□□□□ -2.13
LSM4YER112W YDR274CP87283 123 aa1.75□□□□□ -2.13
LSM4YER112W NUP49Q02199 472 aa1.75□□□□□ -2.13
LSM4YER112W MRPS17Q03246 237 aaPredicted RBP1.75□□□□□ -2.13
LSM4YER112W YNG1Q08465 219 aa1.75□□□□□ -2.13
LSM4YER112W YDL180WQ12301 547 aa1.75□□□□□ -2.13
LSM4YER112W YLR236CA0A023PZG4 107 aa1.74□□□□□ -2.13
LSM4YER112W CDC36P06100 191 aaPredicted RBP1.74□□□□□ -2.13
LSM4YER112W SIR2P06700 562 aa1.74□□□□□ -2.13
LSM4YER112W ATP15P21306 62 aa1.74□□□□□ -2.13
LSM4YER112W KNH1P50112 268 aa1.74□□□□□ -2.13
LSM4YER112W CUE4Q04201 117 aaPredicted RBP1.74□□□□□ -2.13
LSM4YER112W QCR8P08525 94 aa1.73□□□□□ -2.13
LSM4YER112W HNT1Q04344 158 aaKnown RBP1.73□□□□□ -2.13
LSM4YER112W FUS2Q05670 677 aa1.73□□□□□ -2.13
LSM4YER112W ODC2Q99297 307 aa1.73□□□□□ -2.13
LSM4YER112W CBF1P17106 351 aa1.72□□□□□ -2.13
LSM4YER112W AIM25P47140 327 aa1.72□□□□□ -2.13
LSM4YER112W GET1P53192 235 aa1.72□□□□□ -2.13
LSM4YER112W YOL160WQ08321 113 aa1.72□□□□□ -2.13
LSM4YER112W CPA1P07258 411 aaKnown RBP1.71□□□□□ -2.14
LSM4YER112W RPL27AP0C2H6 136 aaKnown RBP1.71□□□□□ -2.14
LSM4YER112W YCR090CP25654 182 aaKnown RBP1.71□□□□□ -2.14
LSM4YER112W KDX1P36005 433 aa1.71□□□□□ -2.14
LSM4YER112W AIM2P39721 246 aa1.71□□□□□ -2.14
LSM4YER112W GET4Q12125 312 aa1.71□□□□□ -2.14
LSM4YER112W MATALPHA2P0CY08 210 aa1.7□□□□□ -2.14
LSM4YER112W HMLALPHA2P0CY09 210 aa1.7□□□□□ -2.14
LSM4YER112W OCH1P31755 480 aa1.7□□□□□ -2.14
LSM4YER112W ECM4P36156 370 aa1.7□□□□□ -2.14
LSM4YER112W OPY1P38271 328 aa1.7□□□□□ -2.14
LSM4YER112W MMS2P53152 137 aa1.7□□□□□ -2.14
LSM4YER112W GGA1Q06336 557 aa1.7□□□□□ -2.14
LSM4YER112W ADF1Q2V2Q1 113 aa1.7□□□□□ -2.14
LSM4YER112W SEC11P15367 167 aa1.69□□□□□ -2.14
LSM4YER112W YER034WP40022 185 aaKnown RBP1.69□□□□□ -2.14
LSM4YER112W ERG10P41338 398 aaKnown RBP1.69□□□□□ -2.14
LSM4YER112W ABP140Q08641 628 aaKnown RBP1.69□□□□□ -2.14
LSM4YER112W RAD28Q12021 506 aa1.69□□□□□ -2.14
LSM4YER112W CNB1P25296 175 aa1.68□□□□□ -2.14
LSM4YER112W ASF2P32448 525 aaPredicted RBP1.68□□□□□ -2.14
LSM4YER112W PAN3P36102 679 aaPredicted RBP1.68□□□□□ -2.14
LSM4YER112W MPA43P53583 542 aaPredicted RBP1.68□□□□□ -2.14
LSM4YER112W DYN3Q04949 312 aa1.68□□□□□ -2.14
LSM4YER112W JIP3O13555 125 aa1.67□□□□□ -2.14
LSM4YER112W MBF1O14467 151 aaKnown RBP1.67□□□□□ -2.14
LSM4YER112W MRS1P07266 363 aa1.67□□□□□ -2.14
LSM4YER112W YPK2P18961 677 aa1.67□□□□□ -2.14
LSM4YER112W YER076CP40049 302 aa1.67□□□□□ -2.14
LSM4YER112W YER134CP40081 178 aa1.67□□□□□ -2.14
LSM4YER112W SKI6P46948 246 aaPredicted RBP1.67□□□□□ -2.14
LSM4YER112W YHR007C-AQ07074 71 aa1.67□□□□□ -2.14
LSM4YER112W YCL012CQ8J0M4 134 aa1.67□□□□□ -2.14
LSM4YER112W TVP23P38962 199 aa1.66□□□□□ -2.14
LSM4YER112W RIO2P40160 425 aaKnown RBP1.66□□□□□ -2.14
LSM4YER112W NOP19P53317 196 aaPredicted RBP1.66□□□□□ -2.14
LSM4YER112W UBC7Q02159 165 aa1.66□□□□□ -2.14
LSM4YER112W YPR174CQ06616 221 aaPredicted RBP1.66□□□□□ -2.14
LSM4YER112W YNL146C-AQ3E7Z1 64 aa1.66□□□□□ -2.14
LSM4YER112W MSB2P32334 1306 aa1.66□□□□□ -2.14
LSM4YER112W QCR7P00128 127 aa1.65□□□□□ -2.15
LSM4YER112W POR1P04840 283 aaKnown RBP1.65□□□□□ -2.15
LSM4YER112W SPO13P23624 291 aa1.65□□□□□ -2.15
LSM4YER112W YEA4P40004 342 aa1.65□□□□□ -2.15
LSM4YER112W YLR036CQ07986 203 aa1.65□□□□□ -2.15
LSM4YER112W DGA1Q08650 418 aa1.65□□□□□ -2.15
LSM4YER112W SNF4P12904 322 aa1.64□□□□□ -2.15
LSM4YER112W VMA22P38784 181 aa1.64□□□□□ -2.15
LSM4YER112W SER2P42941 309 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 263.9 ms