RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W BET1P22804 142 aa1.66□□□□□ -2.14
SLD5YDR489W SNC2P33328 115 aa1.66□□□□□ -2.14
SLD5YDR489W YET1P35723 206 aa1.66□□□□□ -2.14
SLD5YDR489W SHE2P36068 246 aaKnown RBP RIP-Chip data1.66□□□□□ -2.14not detected
SLD5YDR489W TRM5P38793 499 aa1.66□□□□□ -2.14
SLD5YDR489W HMF1P40037 129 aaKnown RBP1.66□□□□□ -2.14
SLD5YDR489W VTC1P40046 129 aaRIP-Chip data1.66□□□□□ -2.14not detected
SLD5YDR489W GET1P53192 235 aa1.66□□□□□ -2.14
SLD5YDR489W YLR162WQ06235 118 aa1.66□□□□□ -2.14
SLD5YDR489W IKI3Q06706 1349 aaKnown RBP1.66□□□□□ -2.14
SLD5YDR489W FAS1P07149 2051 aaKnown RBP1.65□□□□□ -2.14
SLD5YDR489W RPL25P04456 142 aaKnown RBP1.65□□□□□ -2.15
SLD5YDR489W MATALPHA2P0CY08 210 aa1.65□□□□□ -2.15
SLD5YDR489W HMLALPHA2P0CY09 210 aa1.65□□□□□ -2.15
SLD5YDR489W CBF1P17106 351 aa1.65□□□□□ -2.15
SLD5YDR489W CNB1P25296 175 aa1.65□□□□□ -2.15
SLD5YDR489W SKG1P36169 355 aa1.65□□□□□ -2.15
SLD5YDR489W GAA1P39012 614 aa1.65□□□□□ -2.15
SLD5YDR489W YRA1Q12159 226 aaKnown RBP1.65□□□□□ -2.15
SLD5YDR489W ATG40Q99325 256 aa1.65□□□□□ -2.15
SLD5YDR489W UBR2Q07963 1872 aa1.65□□□□□ -2.15
SLD5YDR489W SIR2P06700 562 aa1.64□□□□□ -2.15
SLD5YDR489W ASF2P32448 525 aaPredicted RBP1.64□□□□□ -2.15
SLD5YDR489W YBR219CP38317 127 aa1.64□□□□□ -2.15
SLD5YDR489W YBR285WP38354 144 aa1.64□□□□□ -2.15
SLD5YDR489W CGR1P53188 120 aa1.64□□□□□ -2.15
SLD5YDR489W POP3P53833 195 aaPredicted RBP1.64□□□□□ -2.15
SLD5YDR489W YOL160WQ08321 113 aa1.64□□□□□ -2.15
SLD5YDR489W RPL27AP0C2H6 136 aaKnown RBP1.63□□□□□ -2.15
SLD5YDR489W YPK2P18961 677 aa1.63□□□□□ -2.15
SLD5YDR489W YGL010WP25338 174 aa1.63□□□□□ -2.15
SLD5YDR489W ADE1P27616 306 aa1.63□□□□□ -2.15
SLD5YDR489W OCH1P31755 480 aa1.63□□□□□ -2.15
SLD5YDR489W UPS2P35200 230 aa1.63□□□□□ -2.15
SLD5YDR489W FMP23P38231 175 aa1.63□□□□□ -2.15
SLD5YDR489W YBR220CP38318 560 aa1.63□□□□□ -2.15
SLD5YDR489W GLE2P40066 365 aa1.63□□□□□ -2.15
SLD5YDR489W AIM25P47140 327 aa1.63□□□□□ -2.15
SLD5YDR489W ANT1Q06497 328 aa1.63□□□□□ -2.15
SLD5YDR489W MDM32Q12171 622 aa1.63□□□□□ -2.15
SLD5YDR489W MRS1P07266 363 aa1.62□□□□□ -2.15
SLD5YDR489W KDX1P36005 433 aa1.62□□□□□ -2.15
SLD5YDR489W YKR045CP36138 183 aa1.62□□□□□ -2.15
SLD5YDR489W VMA22P38784 181 aa1.62□□□□□ -2.15
SLD5YDR489W SKI6P46948 246 aaPredicted RBP1.62□□□□□ -2.15
SLD5YDR489W MMS2P53152 137 aa1.62□□□□□ -2.15
SLD5YDR489W CPA1P07258 411 aaKnown RBP1.61□□□□□ -2.15
SLD5YDR489W OPY1P38271 328 aa1.61□□□□□ -2.15
SLD5YDR489W MPC3P53311 146 aa1.61□□□□□ -2.15
SLD5YDR489W YDR274CP87283 123 aa1.61□□□□□ -2.15
SLD5YDR489W CSI2Q08054 341 aa1.61□□□□□ -2.15
SLD5YDR489W ODC2Q99297 307 aa1.61□□□□□ -2.15
SLD5YDR489W YLR236CA0A023PZG4 107 aa1.6□□□□□ -2.15
SLD5YDR489W RPL2AP0CX45 254 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W RPL2BP0CX46 254 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W CKS1P20486 150 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W APA2P22108 325 aa1.6□□□□□ -2.15
SLD5YDR489W TMA19P35691 167 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W YBR209WP38311 105 aa1.6□□□□□ -2.15
SLD5YDR489W YER034WP40022 185 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W RPL13BP40212 199 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W ARP3P47117 449 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W EAF6P47128 113 aa1.6□□□□□ -2.15
SLD5YDR489W KNH1P50112 268 aa1.6□□□□□ -2.15
SLD5YDR489W UBC12P52491 188 aa1.6□□□□□ -2.15
SLD5YDR489W ARO80Q04052 950 aa1.6□□□□□ -2.15
SLD5YDR489W HNT1Q04344 158 aaKnown RBP1.6□□□□□ -2.15
SLD5YDR489W RPL13AQ12690 199 aaPredicted RBP1.6□□□□□ -2.15
SLD5YDR489W FLO9P39712 1322 aa1.6□□□□□ -2.15
SLD5YDR489W MBF1O14467 151 aaKnown RBP1.59□□□□□ -2.15
SLD5YDR489W YOL162WP0CF19 215 aa1.59□□□□□ -2.15
SLD5YDR489W TFC1P32367 649 aa1.59□□□□□ -2.15
SLD5YDR489W ERJ5P43613 295 aaPredicted RBP1.59□□□□□ -2.15
SLD5YDR489W YNL184CP53876 108 aa1.59□□□□□ -2.15
SLD5YDR489W PHO85P17157 305 aa1.58□□□□□ -2.16
SLD5YDR489W SPO13P23624 291 aa1.58□□□□□ -2.16
SLD5YDR489W MZM1Q03429 123 aaPredicted RBP1.58□□□□□ -2.16
SLD5YDR489W MET5P47169 1442 aa1.57□□□□□ -2.16
SLD5YDR489W SEC11P15367 167 aa1.57□□□□□ -2.16
SLD5YDR489W PAN3P36102 679 aaPredicted RBP1.57□□□□□ -2.16
SLD5YDR489W YEA4P40004 342 aa1.57□□□□□ -2.16
SLD5YDR489W SER2P42941 309 aa1.57□□□□□ -2.16
SLD5YDR489W SAY1P53324 424 aa1.57□□□□□ -2.16
SLD5YDR489W POR1P04840 283 aaKnown RBP1.56□□□□□ -2.16
SLD5YDR489W YCR090CP25654 182 aaKnown RBP1.56□□□□□ -2.16
SLD5YDR489W YJR111CP47148 283 aaKnown RBP1.56□□□□□ -2.16
SLD5YDR489W ARO8P53090 500 aaKnown RBP1.56□□□□□ -2.16
SLD5YDR489W NUP49Q02199 472 aa1.56□□□□□ -2.16
SLD5YDR489W DYN3Q04949 312 aa1.56□□□□□ -2.16
SLD5YDR489W NAT3Q06504 195 aa1.56□□□□□ -2.16
SLD5YDR489W RIO1Q12196 484 aaKnown RBP1.56□□□□□ -2.16
SLD5YDR489W RAD9P14737 1309 aa1.56□□□□□ -2.16
SLD5YDR489W YAR023CD6VPM8 179 aa1.55□□□□□ -2.16
SLD5YDR489W GPA2P10823 449 aa1.55□□□□□ -2.16
SLD5YDR489W CUE4Q04201 117 aaPredicted RBP1.55□□□□□ -2.16
SLD5YDR489W YMR315WQ04869 349 aaKnown RBP1.55□□□□□ -2.16
SLD5YDR489W FPR1P20081 114 aaKnown RBP1.54□□□□□ -2.16
SLD5YDR489W YER134CP40081 178 aa1.54□□□□□ -2.16
SLD5YDR489W RTC4P53850 401 aa1.54□□□□□ -2.16
SLD5YDR489W FUS2Q05670 677 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 101.4 ms