RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC13	YDL220C	UMP1	P38293	148 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	MIC12	P38341	106 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	DLS1	P40366	167 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	PAU12	P53343	120 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	APS2	Q00381	147 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	IZH1	Q03419	316 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	NDD1	Q08887	554 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	HVG1	P0CE11	249 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	YMC1	P32331	307 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	ERG24	P32462	438 aa	Known RBP	6.26	□□□□□ -1.41
CDC13	YDL220C	MRP21	P38175	177 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	TIS11	P47977	285 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	THI74	Q04083	370 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	YDR344C	Q05510	147 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	YOR385W	Q08909	290 aa		6.26	□□□□□ -1.41
CDC13	YDL220C	MRPL23	Q12487	163 aa	Predicted RBP	6.26	□□□□□ -1.41
CDC13	YDL220C	HYP2	P23301	157 aa	Known RBP	6.25	□□□□□ -1.41
CDC13	YDL220C	YKU70	P32807	602 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	PAU16	P35994	123 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	YFL054C	P43549	646 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	HSV2	P50079	448 aa	Predicted RBP	6.25	□□□□□ -1.41
CDC13	YDL220C	MRPL19	P53875	158 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	PPA2	P28239	310 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	SFH5	P47008	294 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	PMT3	P47190	753 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	NUP53	Q03790	475 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	YMR166C	Q03829	368 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	SNO4	Q04902	237 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	HSP33	Q08914	237 aa	Known RBP	6.25	□□□□□ -1.41
CDC13	YDL220C	HSP32	Q08992	237 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	PMD1	P32634	1753 aa		6.25	□□□□□ -1.41
CDC13	YDL220C	CYC3	P06182	269 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	FCY2	P17064	533 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	MRP49	P32388	137 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	SDS24	P38314	527 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	ATF1	P40353	525 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	OYE3	P41816	400 aa	Predicted RBP	6.24	□□□□□ -1.41
CDC13	YDL220C	VNX1	P42839	908 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	VPS25	P47142	202 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	PDR16	P53860	351 aa	Known RBP	6.24	□□□□□ -1.41
CDC13	YDL220C	RSF1	Q05043	376 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	RPL27A	P0C2H6	136 aa	Known RBP	6.24	□□□□□ -1.41
CDC13	YDL220C	RPL27B	P0C2H7	136 aa	Known RBP	6.24	□□□□□ -1.41
CDC13	YDL220C	NPR1	P22211	790 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	PAU2	P32612	120 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	ADH5	P38113	351 aa	Known RBP	6.24	□□□□□ -1.41
CDC13	YDL220C	YER076C	P40049	302 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	NCE103	P53615	221 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	HST3	P53687	447 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	SUR7	P54003	302 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	NRG1	Q03125	231 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	ENV9	Q08651	330 aa		6.24	□□□□□ -1.41
CDC13	YDL220C	YOR062C	P36025	268 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	DRE2	P36152	348 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	YHL026C	P38740	315 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	EMC4	P53073	190 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	PGA1	P53896	198 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	PFA4	Q12006	378 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	PPZ2	P33329	710 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	YHR138C	P38841	114 aa	Predicted RBP	6.23	□□□□□ -1.41
CDC13	YDL220C	TIM10	P87108	93 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	ASM4	Q05166	528 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	HAA1	Q12753	694 aa	Known RBP	6.23	□□□□□ -1.41
CDC13	YDL220C	YLR415C	O13578	112 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	NFS1	P25374	497 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	NUD1	P32336	851 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	ZRT1	P32804	376 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	TKL2	P33315	681 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	YKL102C	P34249	101 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	YKL071W	P36086	256 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	SDP1	P40479	209 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	CIN2	P46670	268 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	CRD1	Q07560	283 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	WSC3	Q12215	556 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	POC4	Q12245	148 aa	Predicted RBP	6.23	□□□□□ -1.41
CDC13	YDL220C	ATO3	Q12359	275 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	LAA1	P39526	2014 aa		6.23	□□□□□ -1.41
CDC13	YDL220C	YER039C-A	P0CD97	72 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	HMRA1	P0CY11	126 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	YGL010W	P25338	174 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	PRE2	P30656	287 aa	Known RBP	6.22	□□□□□ -1.41
CDC13	YDL220C	RAD23	P32628	398 aa	Known RBP	6.22	□□□□□ -1.41
CDC13	YDL220C	MTC7	P32633	139 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	MCR1	P36060	302 aa	Known RBP	6.22	□□□□□ -1.41
CDC13	YDL220C	MRPL16	P38064	232 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	YGR039W	P53225	103 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	YMR206W	Q03695	313 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	HNT1	Q04344	158 aa	Known RBP	6.22	□□□□□ -1.41
CDC13	YDL220C	ODC2	Q99297	307 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	YPT1	P01123	206 aa	Known RBP	6.22	□□□□□ -1.41
CDC13	YDL220C	GAS1	P22146	559 aa	Known RBP	6.22	□□□□□ -1.41
CDC13	YDL220C	YJU3	P28321	313 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	HIT1	P46973	164 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	YIP1	P53039	248 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	UBC7	Q02159	165 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	ATG33	Q06485	197 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	TAZ1	Q06510	381 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	HRT1	Q08273	121 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	YPL162C	Q12042	273 aa		6.22	□□□□□ -1.41
CDC13	YDL220C	YLR363W-A	Q3E747	85 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms