RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W UBC11P52492 156 aa5.53□□□□□ -1.52
SLX5YDL013W YGL230CP53074 147 aa5.53□□□□□ -1.52
SLX5YDL013W YMR310CQ04867 317 aaPredicted RBP5.53□□□□□ -1.52
SLX5YDL013W MCT1Q12283 360 aa5.53□□□□□ -1.52
SLX5YDL013W YEL009C-AA0A023PZF2 135 aa5.52□□□□□ -1.53
SLX5YDL013W RPS13P05756 151 aaKnown RBP5.52□□□□□ -1.53
SLX5YDL013W RAD52P06778 471 aaKnown RBP5.52□□□□□ -1.53
SLX5YDL013W NOP1P15646 327 aaKnown RBP5.52□□□□□ -1.53
SLX5YDL013W SLM5P25345 492 aaKnown RBP5.52□□□□□ -1.53
SLX5YDL013W TIP1P27654 210 aaPredicted RBP5.52□□□□□ -1.53
SLX5YDL013W SPS18P32572 300 aa5.52□□□□□ -1.53
SLX5YDL013W PHO88P38264 188 aaPredicted RBP5.52□□□□□ -1.53
SLX5YDL013W RTC2P38279 296 aa5.52□□□□□ -1.53
SLX5YDL013W NDT80P38830 627 aa5.52□□□□□ -1.53
SLX5YDL013W GET2P40056 285 aa5.52□□□□□ -1.53
SLX5YDL013W THG1P53215 237 aaKnown RBP5.52□□□□□ -1.53
SLX5YDL013W YGR168CP53293 376 aa5.52□□□□□ -1.53
SLX5YDL013W GPI15P53961 229 aa5.52□□□□□ -1.53
SLX5YDL013W TAZ1Q06510 381 aa5.52□□□□□ -1.53
SLX5YDL013W SWC7Q06707 132 aa5.52□□□□□ -1.53
SLX5YDL013W HUT1Q12520 339 aa5.52□□□□□ -1.53
SLX5YDL013W NTF2P33331 125 aaKnown RBP5.51□□□□□ -1.53
SLX5YDL013W SHB17P36136 271 aaKnown RBP5.51□□□□□ -1.53
SLX5YDL013W YBR241CP38142 488 aa5.51□□□□□ -1.53
SLX5YDL013W TRS20P38334 175 aa5.51□□□□□ -1.53
SLX5YDL013W VMA21P41806 77 aa5.51□□□□□ -1.53
SLX5YDL013W YNR071CP53757 342 aa5.51□□□□□ -1.53
SLX5YDL013W FMP41P53889 259 aaKnown RBP5.51□□□□□ -1.53
SLX5YDL013W KTR5P53966 522 aaPredicted RBP5.51□□□□□ -1.53
SLX5YDL013W POS5Q06892 414 aa5.51□□□□□ -1.53
SLX5YDL013W RPL7BQ12213 244 aaKnown RBP5.51□□□□□ -1.53
SLX5YDL013W YOS1Q3E834 85 aa5.51□□□□□ -1.53
SLX5YDL013W MYO1P08964 1928 aa5.51□□□□□ -1.53
SLX5YDL013W SEC4P07560 215 aaKnown RBP5.51□□□□□ -1.53
SLX5YDL013W CHO1P08456 276 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-LR1P0C2J4 438 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-FP0CX61 438 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-GR2P0CX62 438 aa5.51□□□□□ -1.53
SLX5YDL013W UBC5P15732 148 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-CP25383 438 aa5.51□□□□□ -1.53
SLX5YDL013W MTC7P32633 139 aa5.51□□□□□ -1.53
SLX5YDL013W VHS2P40463 436 aa5.51□□□□□ -1.53
SLX5YDL013W ATG18P43601 500 aa5.51□□□□□ -1.53
SLX5YDL013W OST3P48439 350 aa5.51□□□□□ -1.53
SLX5YDL013W YNL095CP53932 642 aa5.51□□□□□ -1.53
SLX5YDL013W IRC15Q02733 499 aa5.51□□□□□ -1.53
SLX5YDL013W COF1Q03048 143 aaKnown RBP5.51□□□□□ -1.53
SLX5YDL013W RSM10Q03201 203 aa5.51□□□□□ -1.53
SLX5YDL013W YMR178WQ03219 274 aaKnown RBP5.51□□□□□ -1.53
SLX5YDL013W TY2A-DR2Q03483 438 aa5.51□□□□□ -1.53
SLX5YDL013W PIN3Q06449 215 aa5.51□□□□□ -1.53
SLX5YDL013W CTR3Q06686 241 aa5.51□□□□□ -1.53
SLX5YDL013W NAT5Q08689 176 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-BQ12260 438 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-OR2Q12293 438 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-DR1Q12392 438 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-OR1Q12439 438 aa5.51□□□□□ -1.53
SLX5YDL013W TY2A-DR3Q99303 438 aa5.51□□□□□ -1.53
SLX5YDL013W RIF1P29539 1916 aa5.5□□□□□ -1.53
SLX5YDL013W INO4P13902 151 aa5.5□□□□□ -1.53
SLX5YDL013W REC114P32841 428 aa5.5□□□□□ -1.53
SLX5YDL013W YKL187CP34231 750 aa5.5□□□□□ -1.53
SLX5YDL013W AUR1P36107 401 aaPredicted RBP5.5□□□□□ -1.53
SLX5YDL013W LCB3P47013 409 aa5.5□□□□□ -1.53
SLX5YDL013W SBH1P52870 82 aa5.5□□□□□ -1.53
SLX5YDL013W VEL1P53058 206 aa5.5□□□□□ -1.53
SLX5YDL013W COQ11Q05892 277 aa5.5□□□□□ -1.53
SLX5YDL013W PAU23Q07987 124 aa5.5□□□□□ -1.53
SLX5YDL013W PEX27Q08580 376 aa5.5□□□□□ -1.53
SLX5YDL013W RDL2Q08742 149 aaKnown RBP5.5□□□□□ -1.53
SLX5YDL013W PAU17Q12370 124 aa5.5□□□□□ -1.53
SLX5YDL013W RPL12AP0CX53 165 aaKnown RBP5.49□□□□□ -1.53
SLX5YDL013W RPL12BP0CX54 165 aa5.49□□□□□ -1.53
SLX5YDL013W TAH1P25638 111 aaPredicted RBP5.49□□□□□ -1.53
SLX5YDL013W YSC83P32792 385 aa5.49□□□□□ -1.53
SLX5YDL013W ZRT3P34240 503 aa5.49□□□□□ -1.53
SLX5YDL013W YJL193WP39542 402 aa5.49□□□□□ -1.53
SLX5YDL013W SAS2P40963 338 aa5.49□□□□□ -1.53
SLX5YDL013W COQ5P49017 307 aa5.49□□□□□ -1.53
SLX5YDL013W RPL22BP56628 122 aaKnown RBP5.49□□□□□ -1.53
SLX5YDL013W HSK3P69852 69 aa5.49□□□□□ -1.53
SLX5YDL013W YOR376WQ08900 122 aa5.49□□□□□ -1.53
SLX5YDL013W PEX11Q12462 236 aa5.49□□□□□ -1.53
SLX5YDL013W CKS1P20486 150 aaKnown RBP5.49□□□□□ -1.53
SLX5YDL013W ERG8P24521 451 aa5.49□□□□□ -1.53
SLX5YDL013W YCR007CP25354 239 aa5.49□□□□□ -1.53
SLX5YDL013W YCR102CP25608 368 aa5.49□□□□□ -1.53
SLX5YDL013W PRE2P30656 287 aaKnown RBP5.49□□□□□ -1.53
SLX5YDL013W ACB1P31787 87 aa5.49□□□□□ -1.53
SLX5YDL013W UTR5P32630 166 aa5.49□□□□□ -1.53
SLX5YDL013W TRR2P38816 342 aa5.49□□□□□ -1.53
SLX5YDL013W LYS1P38998 373 aaRIP-Chip data5.49□□□□□ -1.53not detected
SLX5YDL013W AVT7P40501 490 aa5.49□□□□□ -1.53
SLX5YDL013W YIL059CP40520 121 aa5.49□□□□□ -1.53
SLX5YDL013W CTR1P49573 406 aa5.49□□□□□ -1.53
SLX5YDL013W SYF2P53277 215 aaPredicted RBP5.49□□□□□ -1.53
SLX5YDL013W ERV29P53337 310 aa5.49□□□□□ -1.53
SLX5YDL013W WSC2P53832 503 aa5.49□□□□□ -1.53
SLX5YDL013W GRX5Q02784 150 aa5.49□□□□□ -1.53
SLX5YDL013W MRX11Q03079 207 aa5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms