RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W YER076CP40049 302 aa2.13□□□□□ -2.07
SPB1YCL054W PRM10P42946 383 aa2.13□□□□□ -2.07
SPB1YCL054W COS4P43542 379 aa2.13□□□□□ -2.07
SPB1YCL054W BOL2P53082 120 aa2.13□□□□□ -2.07
SPB1YCL054W FMP41P53889 259 aaKnown RBP2.13□□□□□ -2.07
SPB1YCL054W YMR244WQ04018 355 aa2.13□□□□□ -2.07
SPB1YCL054W YOR283WQ12040 230 aaKnown RBP2.13□□□□□ -2.07
SPB1YCL054W YLR126CQ12288 251 aa2.13□□□□□ -2.07
SPB1YCL054W RDI1Q12434 202 aa2.13□□□□□ -2.07
SPB1YCL054W MRX4Q12467 430 aa2.13□□□□□ -2.07
SPB1YCL054W YPL119C-AQ3E751 87 aa2.13□□□□□ -2.07
SPB1YCL054W YMR030W-AQ3E760 96 aa2.13□□□□□ -2.07
SPB1YCL054W YIL046W-AQ3E7Z4 54 aa2.13□□□□□ -2.07
SPB1YCL054W YOL085CQ99345 113 aa2.13□□□□□ -2.07
SPB1YCL054W FAS1P07149 2051 aaKnown RBP2.13□□□□□ -2.07
SPB1YCL054W CUP2P15315 225 aa2.13□□□□□ -2.07
SPB1YCL054W ETR1P38071 380 aa2.13□□□□□ -2.07
SPB1YCL054W OM14P38325 134 aa2.13□□□□□ -2.07
SPB1YCL054W BDH1P39714 382 aa2.13□□□□□ -2.07
SPB1YCL054W KRE29P40026 464 aa2.13□□□□□ -2.07
SPB1YCL054W YER137CP40083 148 aaKnown RBP2.13□□□□□ -2.07
SPB1YCL054W STB1P42845 420 aa2.13□□□□□ -2.07
SPB1YCL054W YJL016WP47072 561 aa2.13□□□□□ -2.07
SPB1YCL054W PET191Q02772 108 aa2.13□□□□□ -2.07
SPB1YCL054W GOT1Q03554 138 aa2.13□□□□□ -2.07
SPB1YCL054W YMR010WQ03687 405 aa2.13□□□□□ -2.07
SPB1YCL054W HPT1Q04178 221 aaKnown RBP2.13□□□□□ -2.07
SPB1YCL054W YPR098CQ06089 161 aa2.13□□□□□ -2.07
SPB1YCL054W YPR127WQ06494 345 aa2.13□□□□□ -2.07
SPB1YCL054W TIR4Q12218 487 aaPredicted RBP2.13□□□□□ -2.07
SPB1YCL054W PST1Q12355 444 aa2.13□□□□□ -2.07
SPB1YCL054W HMS1Q12398 434 aa2.13□□□□□ -2.07
SPB1YCL054W RPL21BQ12672 160 aaKnown RBP2.13□□□□□ -2.07
SPB1YCL054W STT4P37297 1900 aa2.12□□□□□ -2.07
SPB1YCL054W PET54P10834 293 aa2.12□□□□□ -2.07
SPB1YCL054W ALK2P32789 676 aaPredicted RBP2.12□□□□□ -2.07
SPB1YCL054W PTM1P32857 523 aa2.12□□□□□ -2.07
SPB1YCL054W UPS2P35200 230 aa2.12□□□□□ -2.07
SPB1YCL054W CAF4P36130 643 aa2.12□□□□□ -2.07
SPB1YCL054W MRPL3P36516 390 aa2.12□□□□□ -2.07
SPB1YCL054W SMP1P38128 452 aa2.12□□□□□ -2.07
SPB1YCL054W MED8P38304 223 aa2.12□□□□□ -2.07
SPB1YCL054W SMX2P40204 77 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W SNX4P47057 423 aa2.12□□□□□ -2.07
SPB1YCL054W UBC12P52491 188 aa2.12□□□□□ -2.07
SPB1YCL054W YGL204CP53089 101 aa2.12□□□□□ -2.07
SPB1YCL054W YGL034CP53186 121 aa2.12□□□□□ -2.07
SPB1YCL054W COG5P53951 403 aa2.12□□□□□ -2.07
SPB1YCL054W ABF2Q02486 183 aa2.12□□□□□ -2.07
SPB1YCL054W PAL1Q05518 499 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W YOL019WQ08157 551 aa2.12□□□□□ -2.07
SPB1YCL054W SNU23Q12368 194 aaPredicted RBP2.12□□□□□ -2.07
SPB1YCL054W SEC4P07560 215 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W ZWF1P11412 505 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W ECM33P38248 429 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W YHR127WP38833 243 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W PEP8P40335 379 aa2.12□□□□□ -2.07
SPB1YCL054W SBH2P52871 88 aa2.12□□□□□ -2.07
SPB1YCL054W FMP48P53233 369 aa2.12□□□□□ -2.07
SPB1YCL054W RHO3Q00245 231 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W MRX11Q03079 207 aa2.12□□□□□ -2.07
SPB1YCL054W NHP10Q03435 203 aa2.12□□□□□ -2.07
SPB1YCL054W ECM19Q06011 112 aa2.12□□□□□ -2.07
SPB1YCL054W HEM25Q07534 307 aa2.12□□□□□ -2.07
SPB1YCL054W YLR050CQ12155 161 aaKnown RBP2.12□□□□□ -2.07
SPB1YCL054W CYR1P08678 2026 aaKnown RBP2.11□□□□□ -2.07
SPB1YCL054W MRS1P07266 363 aa2.11□□□□□ -2.07
SPB1YCL054W BGL2P15703 313 aaKnown RBP2.11□□□□□ -2.07
SPB1YCL054W DBF2P22204 572 aa2.11□□□□□ -2.07
SPB1YCL054W SFC1P33303 322 aa2.11□□□□□ -2.07
SPB1YCL054W SOL2P37262 315 aa2.11□□□□□ -2.07
SPB1YCL054W HEK2P38199 381 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SPB1YCL054W SSH1P38353 490 aaKnown RBP2.11□□□□□ -2.07
SPB1YCL054W PHO89P38361 574 aa2.11□□□□□ -2.07
SPB1YCL054W AIF1P52923 378 aa2.11□□□□□ -2.07
SPB1YCL054W RRG7Q08774 242 aaPredicted RBP2.11□□□□□ -2.07
SPB1YCL054W YPR011CQ12251 326 aa2.11□□□□□ -2.07
SPB1YCL054W RAX2Q12465 1220 aa2.11□□□□□ -2.07
SPB1YCL054W WIP1Q2V2P8 89 aa2.11□□□□□ -2.07
SPB1YCL054W YHR139C-AO13536 103 aa2.11□□□□□ -2.07
SPB1YCL054W MDM35O60200 86 aa2.11□□□□□ -2.07
SPB1YCL054W ERD2P18414 219 aa2.11□□□□□ -2.07
SPB1YCL054W YCR023CP25351 611 aa2.11□□□□□ -2.07
SPB1YCL054W RPB9P27999 122 aa2.11□□□□□ -2.07
SPB1YCL054W SEN34P39707 275 aa2.11□□□□□ -2.07
SPB1YCL054W COS6P53344 381 aa2.11□□□□□ -2.07
SPB1YCL054W FYV6P53913 173 aa2.11□□□□□ -2.07
SPB1YCL054W HSK3P69852 69 aa2.11□□□□□ -2.07
SPB1YCL054W VHS1Q03785 461 aa2.11□□□□□ -2.07
SPB1YCL054W SPG4Q04438 115 aa2.11□□□□□ -2.07
SPB1YCL054W YDR115WQ04598 105 aa2.11□□□□□ -2.07
SPB1YCL054W RFU1Q08003 200 aa2.11□□□□□ -2.07
SPB1YCL054W RRS1Q08746 203 aaKnown RBP2.11□□□□□ -2.07
SPB1YCL054W YPL278CQ08990 100 aa2.11□□□□□ -2.07
SPB1YCL054W YPL247CQ12523 523 aa2.11□□□□□ -2.07
SPB1YCL054W YCR090CP25654 182 aaKnown RBP2.1□□□□□ -2.07
SPB1YCL054W POP8P38208 133 aa2.1□□□□□ -2.07
SPB1YCL054W SLM6P38343 150 aa2.1□□□□□ -2.07
SPB1YCL054W NVJ1P38881 321 aa2.1□□□□□ -2.07
SPB1YCL054W YGL260WP53056 76 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms