RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	GSTCD	Q8NEC7	633 aa		11.21	□□□□□ -0.62
NECAP1-223	ENST00000640091	PCDHB18P	Q96TA0	734 aa		11.21	□□□□□ -0.62
NECAP1-223	ENST00000640091	CISH	Q9NSE2	258 aa		11.21	□□□□□ -0.62
NECAP1-223	ENST00000640091	CACNG4	Q9UBN1	327 aa		11.21	□□□□□ -0.62
NECAP1-223	ENST00000640091	SALL4	Q9UJQ4	1053 aa		11.21	□□□□□ -0.62
NECAP1-223	ENST00000640091	DERA	Q9Y315	318 aa		11.21	□□□□□ -0.62
NECAP1-223	ENST00000640091		A0A0U1RQF3	1178 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	PTGES	O14684	152 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	KRT86	O43790	486 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	RRP9	O43818	475 aa	Known RBP	11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	CAND2	O75155	1236 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	SELP	P16109	830 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	PDE6C	P51160	858 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	ORC1	Q13415	861 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	GPNMB	Q14956	572 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZNF569	Q5MCW4	686 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	BEST2	Q8NFU1	509 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	CAGE1	Q8TC20	777 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	DDX1	Q92499	740 aa	Known RBP	11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	MMS19	Q96T76	1030 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	SDCBP2	Q9H190	292 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	SMYD3	Q9H7B4	428 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	UBQLN1	Q9UMX0	589 aa	Known RBP	11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	ARL5C	A6NH57	179 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	KIF5C	O60282	957 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	NBN	O60934	754 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	CFH	P08603	1231 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	KCNE1	P15382	129 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	IGFBP6	P24592	240 aa	Predicted RBP	11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	ATIC	P31939	592 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	FMO1	Q01740	532 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	TLE2	Q04725	743 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	TRIM60	Q495X7	471 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	C9orf57	Q5W0N0	161 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	RABGGTA	Q92696	567 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	TAF4B	Q92750	862 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	SCLY	Q96I15	445 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	PCDH10	Q9P2E7	1040 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	PUF60	Q9UHX1	559 aa	Known RBP	11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	SQOR	Q9Y6N5	450 aa		11.2	□□□□□ -0.62
NECAP1-223	ENST00000640091	TRIP11	Q15643	1979 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	CIT	O14578	2027 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	BUB1	O43683	1085 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZNF623	O75123	536 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	ATF7	P17544	494 aa	Predicted RBP	11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	ABCB4	P21439	1286 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	GNA15	P30679	374 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	CTCF	P49711	727 aa	Predicted RBP	11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	CCL23	P55773	120 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	CDR2	Q01850	454 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	FAAP100	Q0VG06	881 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	MYO1E	Q12965	1108 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	BFSP2	Q13515	415 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	MRPL10	Q7Z7H8	261 aa	Known RBP	11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	UBR7	Q8N806	425 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	ARMC5	Q96C12	935 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	PPP1R12C	Q9BZL4	782 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	NENF	Q9UMX5	172 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	SNX9	Q9Y5X1	595 aa		11.19	□□□□□ -0.62
NECAP1-223	ENST00000640091	PIR	O00625	290 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	TLR3	O15455	904 aa	Known RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	MOCS3	O95396	460 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	POMC	P01189	267 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	GJA8	P48165	433 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	SCNN1G	P51170	649 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	GALC	P54803	685 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	NAP1L1	P55209	391 aa	Known RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	ZNF662	Q6ZS27	426 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	HACE1	Q8IYU2	909 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	SLC35F6	Q8N357	371 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	DBF4B	Q8NFT6	615 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	KIF18A	Q8NI77	898 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	PAWR	Q96IZ0	340 aa	Known RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	PPP1R10	Q96QC0	940 aa	Known RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	TRAIP	Q9BWF2	469 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	SEZ6L	Q9BYH1	1024 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	BCO2	Q9BYV7	579 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	VRTN	Q9H8Y1	702 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	HMGXB4	Q9UGU5	601 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	CNTN6	Q9UQ52	1028 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	ATP11B	Q9Y2G3	1177 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	INPP5F	Q9Y2H2	1132 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	ANO9	A1A5B4	782 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	DCDC2C	A8MYV0	355 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	SPTLC1	O15269	473 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	PJA2	O43164	708 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	THAP12	O43422	761 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	FTL	P02792	175 aa	Predicted RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	TH	P07101	528 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	H2AFZ	P0C0S5	128 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	COL6A1	P12109	1028 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	ANXA13	P27216	316 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	CYP2C18	P33260	490 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	BPIFB4	P59827	614 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	TNNC1	P63316	161 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	PKN2	Q16513	984 aa	Known RBP	11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	H2AFV	Q71UI9	128 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	ANKRD33	Q7Z3H0	272 aa		11.18	□□□□□ -0.62
NECAP1-223	ENST00000640091	ECHDC2	Q86YB7	292 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms