RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 POLR2BP30876 1174 aaKnown RBP17.1■□□□□ 0.33
SPIN3-233ENST00000640039 PNPLA4P41247 253 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 AARSP49588 968 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPIN3-233ENST00000640039 DUOXA2Q1HG44 320 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 SV2CQ496J9 727 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 VARS2Q5ST30 1063 aaKnown RBP17.1■□□□□ 0.33
SPIN3-233ENST00000640039 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 LMBRD2Q68DH5 695 aaPredicted RBP17.1■□□□□ 0.33
SPIN3-233ENST00000640039 ZNF280DQ6N043 979 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 CSGALNACT2Q8N6G5 542 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 SMRP1Q8NCR6 262 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 TMEM174Q8WUU8 243 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 CCDC127Q96BQ5 260 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 TSG101Q99816 390 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 EPHX3Q9H6B9 360 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 MAN1C1Q9NR34 630 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 INTS13Q9NVM9 706 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 DMAC2Q9NW81 257 aa17.1■□□□□ 0.33
SPIN3-233ENST00000640039 M0QZQ0 153 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 MBTPS2O43462 519 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 C1RP00736 705 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 PPP1R2P41236 205 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 PRCPP42785 496 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 RBP5P82980 135 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 YWHAHQ04917 246 aaPredicted RBP17.09■□□□□ 0.33
SPIN3-233ENST00000640039 NFIL3Q16649 462 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 CTXN3Q4LDR2 81 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 COBLL1Q53SF7 1204 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 ISM2Q6H9L7 571 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 CES5AQ6NT32 575 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 C1orf127Q8N9H9 656 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 KHSRPQ92945 711 aaKnown RBP eCLIP17.09■□□□□ 0.33
SPIN3-233ENST00000640039 SENP8Q96LD8 212 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 MFSD14AQ96MC6 490 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 CGRRF1Q99675 332 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 CLSTN3Q9BQT9 956 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 APOL5Q9BWW9 433 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 C1QTNF1Q9BXJ1 281 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 SFXN1Q9H9B4 322 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 CD320Q9NPF0 282 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 MAN1B1Q9UKM7 699 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 AGAP1Q9UPQ3 857 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 BACE2Q9Y5Z0 518 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 CDY1Q9Y6F8 540 aa17.09■□□□□ 0.33
SPIN3-233ENST00000640039 PLXNA3P51805 1871 aa17.08■□□□□ 0.33
SPIN3-233ENST00000640039 GRXCR2A6NFK2 248 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 PSMA7O14818 248 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 TGM5O43548 720 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 OR1D2P34982 312 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 ITIH3Q06033 890 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 CAMK4Q16566 473 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 EDRF1Q3B7T1 1238 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 RARS2Q5T160 578 aaKnown RBP17.08■□□□□ 0.32
SPIN3-233ENST00000640039 SYCE2Q6PIF2 218 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 PLEKHA4Q9H4M7 779 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 DSEQ9UL01 958 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 SCN1AP35498 2009 aa17.08■□□□□ 0.32
SPIN3-233ENST00000640039 PTPRJQ12913 1337 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 KPNA7A9QM74 516 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 BIN1O00499 593 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 CYB561D2O14569 222 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 IL9P15248 144 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 TYMPP19971 482 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 BFSP1Q12934 665 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 MYO1EQ12965 1108 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 ADAM9Q13443 819 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 RAB33AQ14088 237 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 METTL23Q86XA0 190 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 KREMEN2Q8NCW0 462 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 OR5B17Q8NGF7 314 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 HDAC7Q8WUI4 952 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 FAM84AQ96KN4 292 aa17.07■□□□□ 0.32
SPIN3-233ENST00000640039 OXCT2Q9BYC2 517 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-233ENST00000640039 USP15Q9Y4E8 981 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-233ENST00000640039 TIMM13Q9Y5L4 95 aaPredicted RBP17.07■□□□□ 0.32
SPIN3-233ENST00000640039 MAPK13O15264 365 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 SPTLC1O15269 473 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 ADAM12O43184 909 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 PHACTR2O75167 634 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 SPATA31D3P0C874 917 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 KRT13P13646 458 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 CASP4P49662 377 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 AP3M2P53677 418 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 ARPP19P56211 112 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 MRPL58Q14197 206 aaKnown RBP17.06■□□□□ 0.32
SPIN3-233ENST00000640039 SMAD2Q15796 467 aaKnown RBP17.06■□□□□ 0.32
SPIN3-233ENST00000640039 ZCWPW2Q504Y3 356 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 OVOS1Q6IE37 1185 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 SLC8B1Q6J4K2 584 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 SPATA31D4Q6ZUB0 917 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 TRAPPC11Q7Z392 1133 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 ADSSL1Q8N142 457 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 C12orf76Q8N812 135 aaPredicted RBP17.06■□□□□ 0.32
SPIN3-233ENST00000640039 PARD3BQ8TEW8 1205 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 RIPOR3Q96MK2 946 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 POP1Q99575 1024 aaKnown RBP17.06■□□□□ 0.32
SPIN3-233ENST00000640039 S1PR5Q9H228 398 aa17.06■□□□□ 0.32
SPIN3-233ENST00000640039 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms