RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 KIAA1211LQ6NV74 962 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 TMC8Q8IU68 726 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 ZBTB8OSQ8IWT0 167 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 HSD17B14Q9BPX1 270 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 EIF2AK1Q9BQI3 630 aaKnown RBP19.96■□□□□ 0.79
CLN6-212ENST00000636020 MKNK1Q9BUB5 465 aa19.96■□□□□ 0.79
CLN6-212ENST00000636020 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
CLN6-212ENST00000636020 POLR3BQ9NW08 1133 aaPredicted RBP19.96■□□□□ 0.79
CLN6-212ENST00000636020 ASCC3Q8N3C0 2202 aaKnown RBP19.96■□□□□ 0.79
CLN6-212ENST00000636020 IGSF10Q6WRI0 2623 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 SMIM28A0A1B0GU29 152 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 ACKR2O00590 384 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 DCLK1O15075 740 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 MARCH6O60337 910 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 EDN1P05305 212 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 CTXN3Q4LDR2 81 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 TMEM196Q5HYL7 178 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 STXBP5Q5T5C0 1151 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 NEK8Q86SG6 692 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 OBP2AQ9NY56 170 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 ADAMTS20P59510 1910 aa19.95■□□□□ 0.78
CLN6-212ENST00000636020 NUP205Q92621 2012 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 DPYSL4O14531 572 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 CCT2P78371 535 aaKnown RBP19.94■□□□□ 0.78
CLN6-212ENST00000636020 MAPK6Q16659 721 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 ITPRIPL2Q3MIP1 535 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 DCAF4L1Q3SXM0 396 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 FSTL4Q6MZW2 842 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 RNF19BQ6ZMZ0 732 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 MAEAQ7L5Y9 396 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 FBXL16Q8N461 479 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 DEFB124Q8NES8 71 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 CCDC43Q96MW1 224 aaKnown RBP19.94■□□□□ 0.78
CLN6-212ENST00000636020 AGXT2Q9BYV1 514 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 C2orf40Q9H1Z8 148 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 KLK13Q9UKR3 277 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 CACNA1EQ15878 2313 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 ABCA7Q8IZY2 2146 aa19.94■□□□□ 0.78
CLN6-212ENST00000636020 KIF26AQ9ULI4 1882 aaPredicted RBP19.94■□□□□ 0.78
CLN6-212ENST00000636020 A0A087WWV3 80 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 PODXLO00592 558 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 KHNYNO15037 678 aaKnown RBP19.93■□□□□ 0.78
CLN6-212ENST00000636020 CCNT1O60563 726 aaKnown RBP19.93■□□□□ 0.78
CLN6-212ENST00000636020 USO1O60763 962 aaKnown RBP19.93■□□□□ 0.78
CLN6-212ENST00000636020 CAPNS1P04632 268 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 PDIA3P30101 505 aaKnown RBP19.93■□□□□ 0.78
CLN6-212ENST00000636020 PLCB2Q00722 1185 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 KARSQ15046 597 aaKnown RBP19.93■□□□□ 0.78
CLN6-212ENST00000636020 POTEDQ86YR6 584 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 TRIM22Q8IYM9 498 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 FAM177A1Q8N128 213 aaPredicted RBP19.93■□□□□ 0.78
CLN6-212ENST00000636020 PIGOQ8TEQ8 1089 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 HHIPQ96QV1 700 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 CCDC113Q9H0I3 377 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 DNAJC25Q9H1X3 360 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 GPSM3Q9Y4H4 160 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 YIPF1Q9Y548 306 aa19.93■□□□□ 0.78
CLN6-212ENST00000636020 HELZ2Q9BYK8 2649 aaKnown RBP19.93■□□□□ 0.78
CLN6-212ENST00000636020 ZIC2O95409 532 aaPredicted RBP19.92■□□□□ 0.78
CLN6-212ENST00000636020 SSRP1Q08945 709 aaKnown RBP19.92■□□□□ 0.78
CLN6-212ENST00000636020 GRSF1Q12849 480 aaKnown RBP eCLIP19.92■□□□□ 0.78
CLN6-212ENST00000636020 XKR4Q5GH76 650 aa19.92■□□□□ 0.78
CLN6-212ENST00000636020 ZNF280DQ6N043 979 aa19.92■□□□□ 0.78
CLN6-212ENST00000636020 PROSER1Q86XN7 944 aa19.92■□□□□ 0.78
CLN6-212ENST00000636020 SLFN12Q8IYM2 578 aa19.92■□□□□ 0.78
CLN6-212ENST00000636020 BEST2Q8NFU1 509 aa19.92■□□□□ 0.78
CLN6-212ENST00000636020 BSNDQ8WZ55 320 aa19.92■□□□□ 0.78
CLN6-212ENST00000636020 DAXXQ9UER7 740 aaPredicted RBP19.92■□□□□ 0.78
CLN6-212ENST00000636020 TPCN1Q9ULQ1 816 aa19.92■□□□□ 0.78
CLN6-212ENST00000636020 CCDC194A0A1B0GVG4 234 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 TRDMT1O14717 391 aaKnown RBP19.91■□□□□ 0.78
CLN6-212ENST00000636020 DEXIO95424 95 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 BAG4O95429 457 aaKnown RBP19.91■□□□□ 0.78
CLN6-212ENST00000636020 VNN2O95498 520 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 XRCC6P12956 609 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLN6-212ENST00000636020 PTPAQ15257 358 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 UAP1L1Q3KQV9 507 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 ALKAL1Q6UXT8 129 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 GAREM2Q75VX8 874 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 BPIFB1Q8TDL5 484 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 CHFRQ96EP1 664 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 SUSD3Q96L08 255 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 AIFM3Q96NN9 605 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 EBF1Q9UH73 591 aa19.91■□□□□ 0.78
CLN6-212ENST00000636020 BPTFQ12830 3046 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 PATE3B3GLJ2 98 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 RNF40O75150 1001 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 CPB1P15086 417 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 LIG1P18858 919 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 EVCP57679 992 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 IRX4P78413 519 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 C19orf48Q6RUI8 117 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 PDZD3Q86UT5 571 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 MCPH1Q8NEM0 835 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 NAP1L4Q99733 375 aaKnown RBP19.9■□□□□ 0.78
CLN6-212ENST00000636020 SLC38A7Q9NVC3 462 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 NUB1Q9Y5A7 615 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 CELSR3Q9NYQ7 3312 aa19.9■□□□□ 0.78
CLN6-212ENST00000636020 FAM221BA6H8Z2 402 aa19.89■□□□□ 0.77
CLN6-212ENST00000636020 MEFVO15553 781 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms