RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-223ENST00000630866 PXMP2Q9NR77 195 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 TRPM5Q9NZQ8 1165 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 EFCAB14O75071 495 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 ZMYND10O75800 440 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 CHRNA3P32297 505 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 SLC8A1P32418 973 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 DSG3P32926 999 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 ERVK-9P63128 1117 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 ERVK-24P63145 666 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 ZKSCAN8Q15776 578 aaPredicted RBP9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 PREPLQ4J6C6 727 aaPredicted RBP9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 KCTD16Q68DU8 428 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 TXNRD3Q86VQ6 643 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 CD302Q8IX05 232 aa9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 CDV3Q9UKY7 258 aaKnown RBP9.05□□□□□ -0.96
SPTAN1-223ENST00000630866 EIF3DO15371 548 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 RTN2O75298 545 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ALDH1A2O94788 518 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 WEE2P0C1S8 567 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 RPA1P27694 616 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ARHGDIAP52565 204 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 EIF2B5Q13144 721 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 IKBKEQ14164 716 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ZNF280DQ6N043 979 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 KCTD17Q8N5Z5 321 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 AGAP3Q96P47 875 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 DNAJC7Q99615 494 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 AGPAT1Q99943 283 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 SPATS2LQ9NUQ6 558 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 NRBP1Q9UHY1 535 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 PCDHGB4Q9UN71 923 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ZNF609O15014 1411 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 NDUFS3O75489 264 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 FSCN1Q16658 493 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 AMHR2Q16671 573 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CES5AQ6NT32 575 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CRLF3Q8IUI8 442 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 NCLNQ969V3 563 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 EPB41L4AQ9HCS5 686 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 VTA1Q9NP79 307 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 EIF3EP60228 445 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 PTPAQ15257 358 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 LRRC23Q53EV4 343 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ZC3H12BQ5HYM0 836 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 NFRKBQ6P4R8 1299 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 PDXDC1Q6P996 788 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 TBC1D1Q86TI0 1168 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CSGALNACT1Q8TDX6 532 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 USP33Q8TEY7 942 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 PPP1R2P1Q96PQ5 205 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 SPATA16Q9BXB7 569 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 TEX12Q9BXU0 123 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CAPS2Q9BXY5 557 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 SETD4Q9NVD3 440 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 GPRC5DQ9NZD1 345 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 DDTLA6NHG4 134 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 TLR2O60603 784 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 HLA-DRAP01903 254 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CKBP12277 381 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 IL1R1P14778 569 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CAV1Q03135 178 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 PLD1Q13393 1074 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 HASPINQ8TF76 798 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 GMCL1Q96IK5 515 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 KDM4CQ9H3R0 1056 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 APEX2Q9UBZ4 518 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 PITPNM2Q9BZ72 1349 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CYB561D2O14569 222 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 KCNN4O15554 427 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 LZTS3O60299 673 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 GRAP2O75791 330 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ASS1P00966 412 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 TGFB3P10600 412 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ATP1A3P13637 1013 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 DPYDQ12882 1025 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 METTL7BQ6UX53 244 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 GMCL1P1Q8NEA9 526 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ZC3H15Q8WU90 426 aaKnown RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ZFYVE1Q9HBF4 777 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 AP1G2O75843 785 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 DDHD2O94830 711 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 ACVR2BQ13705 512 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 OSMRQ99650 979 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 TRIM9Q9C026 710 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 KIAA1683Q9H0B3 1180 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CYP4F11Q9HBI6 524 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 MAD2L2Q9UI95 211 aa9.04□□□□□ -0.96
SPTAN1-223ENST00000630866 PHLPP1O60346 1717 aa9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 PXDNLA1KZ92 1463 aa9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 GFAPP14136 432 aa9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 PPIL2Q13356 520 aa9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 PDIA6Q15084 440 aa9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 PCSK7Q16549 785 aa9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 ZC2HC1CQ53FD0 456 aaPredicted RBP9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 UBA3Q8TBC4 463 aa9.03□□□□□ -0.96
SPTAN1-223ENST00000630866 SLC26A7Q8TE54 656 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms