RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 M0QZQ0 153 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 GPR37L1O60883 481 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 PRPF40AO75400 957 aaKnown RBP13.33□□□□□ -0.28
CBWD3-218ENST00000622755 RFPL2O75678 378 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 TNNC2P02585 160 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 ADSSP30520 456 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 ROR1Q01973 937 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 KCNA1Q09470 495 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 CUL4BQ13620 913 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 PTPN21Q16825 1174 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 C9orf57Q5W0N0 161 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 OVOS1Q6IE37 1185 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 UBALD2Q8IYN6 164 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 PAGE5Q96GU1 130 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 SORCS3Q9UPU3 1222 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 HCN4Q9Y3Q4 1203 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 TCHHQ07283 1943 aa13.33□□□□□ -0.28
CBWD3-218ENST00000622755 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 PRR33A8MZF0 331 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 C2CD4DB7Z1M9 353 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 KRT19P08727 400 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 TYMPP19971 482 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 LILRA4P59901 499 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 PLD1Q13393 1074 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 IQCEQ6IPM2 695 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
CBWD3-218ENST00000622755 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 EDAQ92838 391 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 CBWD1Q9BRT8 395 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 HSPBP1Q9NZL4 362 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 FBXL5Q9UKA1 691 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 ITGA11Q9UKX5 1188 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 C2orf16Q68DN1 1984 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 ANK1P16157 1881 aa13.32□□□□□ -0.28
CBWD3-218ENST00000622755 CCL16O15467 120 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
CBWD3-218ENST00000622755 CLSTN1O94985 981 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 POU2F2P09086 479 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 ATF2P15336 505 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 FSHRP23945 695 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 ANP32AP39687 249 aaKnown RBP13.31□□□□□ -0.28
CBWD3-218ENST00000622755 KNOP1Q1ED39 458 aaKnown RBP13.31□□□□□ -0.28
CBWD3-218ENST00000622755 CD300LGQ6UXG3 332 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 CRELD2Q6UXH1 353 aaPredicted RBP13.31□□□□□ -0.28
CBWD3-218ENST00000622755 XXYLT1Q8NBI6 393 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 HPS3Q969F9 1004 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 NXPE3Q969Y0 559 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 SENP8Q96LD8 212 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 MFSD14AQ96MC6 490 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 IGSF9Q9P2J2 1179 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 AFF4Q9UHB7 1163 aaKnown RBP13.31□□□□□ -0.28
CBWD3-218ENST00000622755 DENND4AQ7Z401 1863 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
CBWD3-218ENST00000622755 ANO9A1A5B4 782 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 KPNA7A9QM74 516 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 PIRO00625 290 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 CYB561D2O14569 222 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 MEFVO15553 781 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 EXOC3O60645 756 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 HUS1O60921 280 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 OAZ2O95190 189 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ITGB3P05106 788 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 TNNI1P19237 187 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 CYP2J2P51589 502 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 GUCY2FP51841 1108 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 NDUFA8P51970 172 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 RBP5P82980 135 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ZXDAP98168 799 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ADCY1Q08828 1119 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 MRPL58Q14197 206 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 MYBPC2Q14324 1141 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 DUOXA2Q1HG44 320 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 EPM2AIP1Q7L775 607 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 GRASPQ7Z6J2 395 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 SUGP1Q8IWZ8 645 aaKnown RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 CSGALNACT2Q8N6G5 542 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 LRRC52Q8N7C0 313 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ZNF512Q96ME7 567 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 AGPAT3Q9NRZ7 376 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 RMND1Q9NWS8 449 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 CDH22Q9UJ99 828 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 AGAP1Q9UPQ3 857 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 HPSEQ9Y251 543 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 NCOR1O75376 2440 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 FAM86C2PA6NEL3 165 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ZNF197O14709 1029 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ADAM12O43184 909 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 CALUO43852 315 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ABLIM3O94929 683 aa13.3□□□□□ -0.28
CBWD3-218ENST00000622755 ZNF202O95125 648 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms