RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SLC40A1Q9NP59 571 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 ADA2Q9NZK5 511 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 FAM153AQ9UHL3 310 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 TNS2Q63HR2 1409 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 CCT8L1PA6NM43 557 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PAMP19021 973 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 KCTD19Q17RG1 926 aaPredicted RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 LRRC36Q1X8D7 754 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 TMEM259Q4ZIN3 620 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 NCAPGQ9BPX3 1015 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PABPC3Q9H361 631 aaKnown RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 IGSF9BQ9UPX0 1349 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 ZBTB39O15060 712 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 NVLO15381 856 aaKnown RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PFDN1O60925 122 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 DRP2Q13474 957 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 ST13P4Q8IZP2 240 aaPredicted RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 METTL5Q9NRN9 209 aaKnown RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 TYW5A2RUC4 315 aaKnown RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 SMG5Q9UPR3 1016 aaKnown RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 SLC4A7Q9Y6M7 1214 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PTK7Q13308 1070 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 KCNT1Q5JUK3 1230 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 ZNF720Q7Z2F6 126 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 ZKSCAN4Q969J2 545 aaPredicted RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 GTF3C4Q9UKN8 822 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 PIN4Q9Y237 131 aaKnown RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 CUL3Q13618 768 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 FASTKD1Q53R41 847 aaKnown RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 FAXCQ5TGI0 409 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 ARHGEF26Q96DR7 871 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 BLOC1S4Q9NUP1 217 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 SENP1Q9P0U3 644 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 CYP11B1P15538 503 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 SULT1E1P49888 294 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 CCDC33Q8N5R6 958 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 TRIML2Q8N7C3 387 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 CD248Q9HCU0 757 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 P4HA2O15460 535 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 ATP8B4Q8TF62 1192 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 TMBIM4Q9HC24 238 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 MYOZ2Q9NPC6 264 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 NEMP1O14524 444 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 RBP3P10745 1247 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 ACTR2P61160 394 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 ZNF200P98182 395 aaPredicted RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 TMEM132DQ14C87 1099 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 GRIK5Q16478 980 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 OR6P1Q8NGX9 317 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 USP33Q8TEY7 942 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 ABTB1Q969K4 478 aaPredicted RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 TRPV6Q9H1D0 765 aa16.98■□□□□ 0.31
GABRB3-215ENST00000622697 SARS2Q9NP81 518 aaKnown RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.98■□□□□ 0.31
GABRB3-215ENST00000622697 H3BRJ5 948 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 NFIBO00712 420 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 ASAP2O43150 1006 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 HNRNPH1P31943 449 aaKnown RBP16.97■□□□□ 0.31
GABRB3-215ENST00000622697 MXD4Q14582 209 aaPredicted RBP16.97■□□□□ 0.31
GABRB3-215ENST00000622697 TAS1R2Q8TE23 839 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 UPF3AQ9H1J1 476 aaKnown RBP16.97■□□□□ 0.31
GABRB3-215ENST00000622697 NDE1Q9NXR1 346 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 FAM86B1E9PN63 330 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 FAM86B2P0C5J1 330 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 SHMT1P34896 483 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 ESRRGP62508 458 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 AP2B1P63010 937 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 OVGP1Q12889 678 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 ATF7IP2Q5U623 682 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 IGF2BP3O00425 579 aaKnown RBP eCLIP16.97■□□□□ 0.31
GABRB3-215ENST00000622697 KIAA0391O15091 583 aaKnown RBP16.97■□□□□ 0.31
GABRB3-215ENST00000622697 NPTX2P47972 431 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 RNF181Q9P0P0 153 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 TMEM150BA6NC51 233 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 WNT7AO00755 349 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 FOXR1Q6PIV2 292 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 THEM5Q8N1Q8 247 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 CCDC138Q96M89 665 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 TLR10Q9BXR5 811 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 DEFB129Q9H1M3 183 aa16.97■□□□□ 0.31
GABRB3-215ENST00000622697 ICAM1P05362 532 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 CPA2P48052 419 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 IL17AQ16552 155 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 ROPN1BQ9BZX4 212 aaPredicted RBP16.96■□□□□ 0.31
GABRB3-215ENST00000622697 ROPN1Q9HAT0 212 aaPredicted RBP16.96■□□□□ 0.31
GABRB3-215ENST00000622697 WDR70Q9NW82 654 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 RARBP10826 455 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 CUL2Q13617 745 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 SGSM3Q96HU1 749 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 USP20Q9Y2K6 914 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 RRM1P23921 792 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 ACTRT1Q8TDG2 376 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 ANKEF1Q9NU02 776 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 JCADQ9P266 1359 aa16.96■□□□□ 0.31
GABRB3-215ENST00000622697 XPAP23025 273 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms