RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 NFKBIZQ9BYH8 718 aa16.04■□□□□ 0.16
SNX12-206ENST00000622259 LSG1Q9H089 658 aaKnown RBP16.04■□□□□ 0.16
SNX12-206ENST00000622259 DNAJC25Q9H1X3 360 aa16.04■□□□□ 0.16
SNX12-206ENST00000622259 PDZD7Q9H5P4 517 aa16.04■□□□□ 0.16
SNX12-206ENST00000622259 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
SNX12-206ENST00000622259 PI4KAP42356 2102 aa16.04■□□□□ 0.16
SNX12-206ENST00000622259 NUP210Q8TEM1 1887 aaPredicted RBP16.03■□□□□ 0.16
SNX12-206ENST00000622259 PRAMEF12O95522 483 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 EXOSC10Q01780 885 aaKnown RBP16.03■□□□□ 0.16
SNX12-206ENST00000622259 SOX4Q06945 474 aaPredicted RBP16.03■□□□□ 0.16
SNX12-206ENST00000622259 SEMA3BQ13214 749 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 PPP2R5CQ13362 524 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 MRPL58Q14197 206 aaKnown RBP16.03■□□□□ 0.16
SNX12-206ENST00000622259 LEMD2Q8NC56 503 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 PIGKQ92643 395 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 CCDC86Q9H6F5 360 aaKnown RBP16.03■□□□□ 0.16
SNX12-206ENST00000622259 EBF1Q9UH73 591 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 GDAQ9Y2T3 454 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 CFAP46Q8IYW2 2715 aa16.03■□□□□ 0.16
SNX12-206ENST00000622259 ZNF462Q96JM2 2506 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 H0Y626 953 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 TRDMT1O14717 391 aaKnown RBP16.02■□□□□ 0.16
SNX12-206ENST00000622259 TRIM16O95361 564 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 VNN2O95498 520 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 EDN1P05305 212 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 DGKEP52429 567 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 C19orf57Q0VDD7 668 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 GRSF1Q12849 480 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNX12-206ENST00000622259 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
SNX12-206ENST00000622259 ITPRIPL2Q3MIP1 535 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 TRIM61Q5EBN2 209 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 TPGS2Q68CL5 300 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 RNF19BQ6ZMZ0 732 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 GAREM2Q75VX8 874 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 HAUS6Q7Z4H7 955 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 RPLP0P6Q8NHW5 317 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 DYDC2Q96IM9 177 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 TPSD1Q9BZJ3 242 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 HPS4Q9NQG7 708 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 FSCN3Q9NQT6 498 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 AFF4Q9UHB7 1163 aaKnown RBP16.02■□□□□ 0.16
SNX12-206ENST00000622259 EVLQ9UI08 416 aaPredicted RBP16.02■□□□□ 0.16
SNX12-206ENST00000622259 MBD1Q9UIS9 605 aaPredicted RBP16.02■□□□□ 0.16
SNX12-206ENST00000622259 YIPF1Q9Y548 306 aa16.02■□□□□ 0.16
SNX12-206ENST00000622259 DPYSL4O14531 572 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 PRPF3O43395 683 aaKnown RBP16.01■□□□□ 0.15
SNX12-206ENST00000622259 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 DKC1O60832 514 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNX12-206ENST00000622259 APBB3O95704 486 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 ENGP17813 658 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 U2AF2P26368 475 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNX12-206ENST00000622259 DHPSP49366 369 aaPredicted RBP16.01■□□□□ 0.15
SNX12-206ENST00000622259 NECTIN1Q15223 517 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 EEF1DP3Q658K8 133 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 OTUD6AQ7L8S5 288 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 BPIFB1Q8TDL5 484 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 EZH1Q92800 747 aaPredicted RBP16.01■□□□□ 0.15
SNX12-206ENST00000622259 POLR3CQ9BUI4 534 aaPredicted RBP16.01■□□□□ 0.15
SNX12-206ENST00000622259 SMG9Q9H0W8 520 aaKnown RBP16.01■□□□□ 0.15
SNX12-206ENST00000622259 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 TMEM74BQ9NUR3 256 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 DDX25Q9UHL0 483 aaKnown RBP16.01■□□□□ 0.15
SNX12-206ENST00000622259 ADAMTS9Q9P2N4 1935 aa16.01■□□□□ 0.15
SNX12-206ENST00000622259 HECTD1Q9ULT8 2610 aa16■□□□□ 0.15
SNX12-206ENST00000622259 MYO16Q9Y6X6 1858 aa16■□□□□ 0.15
SNX12-206ENST00000622259 UPK3BL1B0FP48 263 aa16■□□□□ 0.15
SNX12-206ENST00000622259 UPK3BL2E5RIL1 263 aa16■□□□□ 0.15
SNX12-206ENST00000622259 PLA2G2AP14555 144 aa16■□□□□ 0.15
SNX12-206ENST00000622259 CYP4A11Q02928 519 aa16■□□□□ 0.15
SNX12-206ENST00000622259 LMAN2Q12907 356 aa16■□□□□ 0.15
SNX12-206ENST00000622259 DMC1Q14565 340 aa16■□□□□ 0.15
SNX12-206ENST00000622259 CTXN3Q4LDR2 81 aa16■□□□□ 0.15
SNX12-206ENST00000622259 LARP1BQ659C4 914 aaKnown RBP16■□□□□ 0.15
SNX12-206ENST00000622259 TRIM68Q6AZZ1 485 aa16■□□□□ 0.15
SNX12-206ENST00000622259 SYT13Q7L8C5 426 aa16■□□□□ 0.15
SNX12-206ENST00000622259 DAGLBQ8NCG7 672 aa16■□□□□ 0.15
SNX12-206ENST00000622259 POLR3FQ9H1D9 316 aaPredicted RBP16■□□□□ 0.15
SNX12-206ENST00000622259 SLKQ9H2G2 1235 aaPredicted RBP16■□□□□ 0.15
SNX12-206ENST00000622259 FZD8Q9H461 694 aa16■□□□□ 0.15
SNX12-206ENST00000622259 OBP2AQ9NY56 170 aa16■□□□□ 0.15
SNX12-206ENST00000622259 NAP1L2Q9ULW6 460 aaPredicted RBP16■□□□□ 0.15
SNX12-206ENST00000622259 TNRC6BQ9UPQ9 1833 aaKnown RBP16■□□□□ 0.15
SNX12-206ENST00000622259 SHROOM3Q8TF72 1996 aa16■□□□□ 0.15
SNX12-206ENST00000622259 GALK1P51570 392 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 PLCB2Q00722 1185 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 EPHA7Q15375 998 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 CCNI2Q6ZMN8 369 aaPredicted RBP15.99■□□□□ 0.15
SNX12-206ENST00000622259 UROC1Q96N76 676 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 FAM83CQ9BQN1 747 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 KCNMB3Q9NPA1 279 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 SCUBE2Q9NQ36 999 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 GPRC5CQ9NQ84 441 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 GKN1Q9NS71 199 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 PRMT7Q9NVM4 692 aaPredicted RBP15.99■□□□□ 0.15
SNX12-206ENST00000622259 UNC79Q9P2D8 2635 aa15.99■□□□□ 0.15
SNX12-206ENST00000622259 KIAA1549LQ6ZVL6 1849 aa15.98■□□□□ 0.15
SNX12-206ENST00000622259 PTPRDP23468 1912 aa15.98■□□□□ 0.15
SNX12-206ENST00000622259 ANTXRLA6NF34 631 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms