RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 ACER1Q8TDN7 264 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 SEC14L1Q92503 715 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 FAM111AQ96PZ2 611 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 IWS1Q96ST2 819 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CYP4F11Q9HBI6 524 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 MRPL47Q9HD33 250 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CHKBQ9Y259 395 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 PARP4Q9UKK3 1724 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 ATP9AO75110 1047 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 MAP3K6O95382 1288 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 KRT19P08727 400 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 SERPINB3P29508 390 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CNGA1P29973 690 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 MMP14P50281 582 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 PEX5P50542 639 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 LMNB2Q03252 620 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 SPIRE1Q08AE8 756 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 Q4G0T1 1027 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 KCNT1Q5JUK3 1230 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CASC4Q6P4E1 433 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 PPM1NQ8N819 430 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CCDC110Q8TBZ0 833 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 MAK16Q9BXY0 300 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 SEPT9Q9UHD8 586 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 VAV3Q9UKW4 847 aa12.04□□□□□ -0.48
PCDHGA11-203ENST00000622044 CCDC22O60826 627 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 TJP3O95049 919 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 ADRB2P07550 413 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 SNHG28P0DPA3 235 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 YWHABP31946 246 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 RANBP1P43487 201 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 WDR4P57081 412 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 MFSD5Q6N075 450 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 LRRC6Q86X45 466 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 RFX6Q8HWS3 928 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 OGFOD1Q8N543 542 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 CERS5Q8N5B7 392 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 CHURC1Q8WUH1 139 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 MCEEQ96PE7 176 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 THTPAQ9BU02 230 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 COA1Q9GZY4 146 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 DENND2DQ9H6A0 471 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 KIAA1586Q9HCI6 787 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 C2CD2Q9Y426 696 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 SLIT2O94813 1529 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 B2RBV5 119 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 GZMAP12544 262 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 QARSP47897 775 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 ALDH18A1P54886 795 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 TFDP1Q14186 410 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 EFTUD2Q15029 972 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 SLC1A5Q15758 541 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 PDIK1LQ8N165 341 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 ZNF483Q8TF39 744 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 WRAP73Q9P2S5 460 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 PSMC3IPQ9P2W1 217 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 COL18A1P39060 1754 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 XIRP1Q702N8 1843 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 SMNDC1O75940 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 P4HBP07237 508 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 VHLP40337 213 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 MTMR1Q13613 665 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 BLMHQ13867 455 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 RFWD3Q6PCD5 774 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 SV2AQ7L0J3 742 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 SCG3Q8WXD2 468 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 HSPH1Q92598 858 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 HSD17B14Q9BPX1 270 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 TXLNGYQ9BZA5 131 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 LRRC19Q9H756 370 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 CORO1CQ9ULV4 474 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 G3BP2Q9UN86 482 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 SMG5Q9UPR3 1016 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
PCDHGA11-203ENST00000622044 TOM1L1O75674 476 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 OSTNP61366 133 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 NR1H3Q13133 447 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 AOC3Q16853 763 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 BMT2Q1RMZ1 405 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 MTERF2Q49AM1 385 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 SCYL2Q6P3W7 929 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 MAB21L3Q8N8X9 362 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 TCP10LQ8TDR4 215 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 UCMAQ8WVF2 138 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 VTI1AQ96AJ9 217 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 DCLRE1BQ9H816 532 aa12.02□□□□□ -0.48
PCDHGA11-203ENST00000622044 CACNA1SQ13698 1873 aa12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 H7C0C1 242 aa12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 SNUPNO95149 360 aaKnown RBP12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 ATP5OP48047 213 aa12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 MGAT5Q09328 741 aa12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 NFX1Q12986 1120 aaKnown RBP12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 ARMC3Q5W041 872 aa12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 RNF43Q68DV7 783 aa12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 ZNF75CPQ92670 426 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 ZNF668Q96K58 619 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA11-203ENST00000622044 MANSC1Q9H8J5 431 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms