RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MMP10P09238 476 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 ALDH1B1P30837 517 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 TAF1BQ53T94 588 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-211ENST00000622020 TXNRD3NBQ6F5E7 133 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 SMC6Q96SB8 1091 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 AGO4Q9HCK5 861 aaKnown RBP16.7■□□□□ 0.26
NPHP4-211ENST00000622020 UBN1Q9NPG3 1134 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 ADGRA3Q8IWK6 1321 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 ASMTLO95671 621 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 CCNE2O96020 404 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 POLGP54098 1239 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-211ENST00000622020 STAT4Q14765 748 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 HHATQ5VTY9 493 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 CAPRIN2Q6IMN6 1127 aaKnown RBP16.7■□□□□ 0.26
NPHP4-211ENST00000622020 RFX8Q6ZV50 586 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 TRABD2AQ86V40 505 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 SUPT20HQ8NEM7 779 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 SLCO2A1Q92959 643 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 CEP170P1Q96L14 293 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 NUDCD1Q96RS6 583 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 TBC1D10AQ9BXI6 508 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
NPHP4-211ENST00000622020 PCDHB4Q9Y5E5 795 aa16.7■□□□□ 0.26
NPHP4-211ENST00000622020 GREB1LQ9C091 1923 aaPredicted RBP16.69■□□□□ 0.26
NPHP4-211ENST00000622020 KLRG2A4D1S0 409 aaPredicted RBP16.69■□□□□ 0.26
NPHP4-211ENST00000622020 KRT4P19013 534 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 CHRNA5P30532 468 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 PCK1P35558 622 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 SLC8A3P57103 927 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 CYP24A1Q07973 514 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 PDIA2Q13087 525 aaKnown RBP16.69■□□□□ 0.26
NPHP4-211ENST00000622020 KLF1Q13351 362 aaPredicted RBP16.69■□□□□ 0.26
NPHP4-211ENST00000622020 RNF43Q68DV7 783 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 ANO5Q75V66 913 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 FAM13CQ8NE31 585 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 NUMBLQ9Y6R0 609 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 SIPA1L1O43166 1804 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 PROSCO94903 275 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 SSTR1P30872 391 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 LVRNQ6Q4G3 990 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 MFSD7Q6UXD7 560 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 MTDHQ86UE4 582 aaKnown RBP16.69■□□□□ 0.26
NPHP4-211ENST00000622020 RHOT1Q8IXI2 618 aa16.69■□□□□ 0.26
NPHP4-211ENST00000622020 C2orf71A6NGG8 1288 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 RAD17O75943 681 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 CCNB1P14635 433 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 SPARCL1Q14515 664 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 BRDTQ58F21 947 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-211ENST00000622020 VTI1AQ96AJ9 217 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 NAF1Q96HR8 494 aaKnown RBP16.68■□□□□ 0.26
NPHP4-211ENST00000622020 FNBP1Q96RU3 617 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 MAK16Q9BXY0 300 aaKnown RBP16.68■□□□□ 0.26
NPHP4-211ENST00000622020 TXLNGQ9NUQ3 528 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 UMODL1Q5DID0 1318 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 AHDC1Q5TGY3 1603 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-211ENST00000622020 A0A0G2JND7 137 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 F8VP50 259 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 SGK1O00141 431 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 MAPK13O15264 365 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 PIK3CAP42336 1068 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 NRLP54845 237 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 MAMLD1Q13495 774 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 CCNG2Q16589 344 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
NPHP4-211ENST00000622020 ZBTB45Q96K62 511 aaPredicted RBP16.68■□□□□ 0.26
NPHP4-211ENST00000622020 T-ENOLP0DO92 83 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 ADRA1DP25100 572 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 NFX1Q12986 1120 aaKnown RBP16.67■□□□□ 0.26
NPHP4-211ENST00000622020 SEPT7Q16181 437 aaKnown RBP16.67■□□□□ 0.26
NPHP4-211ENST00000622020 SMTNL2Q2TAL5 461 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 WDR44Q5JSH3 913 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-211ENST00000622020 CFAP57Q96MR6 1250 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 METTL5Q9NRN9 209 aaKnown RBP16.67■□□□□ 0.26
NPHP4-211ENST00000622020 SERPINA10Q9UK55 444 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 EXOC7Q9UPT5 735 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 IVNS1ABPQ9Y6Y0 642 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 PPP1R12AO14974 1030 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-211ENST00000622020 KRT1P04264 644 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 NCKAP1LP55160 1127 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 MKRN3Q13064 507 aaKnown RBP16.67■□□□□ 0.26
NPHP4-211ENST00000622020 ZBTB41Q5SVQ8 909 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 RFWD3Q6PCD5 774 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 C12orf56Q8IXR9 622 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 MAIP1Q8WWC4 291 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 RAB3IPQ96QF0 476 aaPredicted RBP16.67■□□□□ 0.26
NPHP4-211ENST00000622020 OSBPL1AQ9BXW6 950 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 LGALS13Q9UHV8 139 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 PCDHB2Q9Y5E7 798 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 USH1CQ9Y6N9 552 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 PTPRJQ12913 1337 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 C10orf71Q711Q0 1435 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 HLA-DRAP01903 254 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 KLRC2P26717 231 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 GNA15P30679 374 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 MAN1A1P33908 653 aa16.67■□□□□ 0.26
NPHP4-211ENST00000622020 RPS6P62753 249 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms