RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 HPDLQ96IR7 371 aa22.93■■□□□ 1.26
SPAST-204ENST00000621856 PSMB7Q99436 277 aa22.93■■□□□ 1.26
SPAST-204ENST00000621856 CABYRO75952 493 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 P4HA1P13674 534 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 DNA2P51530 1060 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 UBXN11Q5T124 520 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 TWF2Q6IBS0 349 aaKnown RBP22.92■■□□□ 1.26
SPAST-204ENST00000621856 DAAM2Q86T65 1068 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 CXorf38Q8TB03 319 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 ZNF653Q96CK0 615 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 FAXDC2Q96IV6 333 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 PARP2Q9UGN5 583 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 GRIN2DO15399 1336 aa22.92■■□□□ 1.26
SPAST-204ENST00000621856 RPS6KA5O75582 802 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 AKAP5P24588 427 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 RAP1GAPP47736 663 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 ACLYP53396 1101 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 ITGA7Q13683 1181 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 ZNF394Q53GI3 561 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 BEST2Q8NFU1 509 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 BCO2Q9BYV7 579 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 CXCL16Q9H2A7 254 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 GOLPH3Q9H4A6 298 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 PACSIN2Q9UNF0 486 aaPredicted RBP22.91■■□□□ 1.26
SPAST-204ENST00000621856 UNGP13051 313 aaPredicted RBP22.91■■□□□ 1.26
SPAST-204ENST00000621856 CXCR5P32302 372 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 THPOP40225 353 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 PRMT2P55345 433 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 RPS6KA1Q15418 735 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 NAA35Q5VZE5 725 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 SMYD5Q6GMV2 418 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 PEX26Q7Z412 305 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 RPAINQ86UA6 219 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 PASD1Q8IV76 773 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 CALR3Q96L12 384 aaKnown RBP22.91■■□□□ 1.26
SPAST-204ENST00000621856 SENP6Q9GZR1 1112 aaPredicted RBP22.91■■□□□ 1.26
SPAST-204ENST00000621856 VRTNQ9H8Y1 702 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 HMX1Q9NP08 348 aaPredicted RBP22.91■■□□□ 1.26
SPAST-204ENST00000621856 CNTN3Q9P232 1028 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 NOD1Q9Y239 953 aa22.91■■□□□ 1.26
SPAST-204ENST00000621856 PDCD11Q14690 1871 aaKnown RBP22.9■■□□□ 1.26
SPAST-204ENST00000621856 ATMINO43313 823 aaPredicted RBP22.9■■□□□ 1.26
SPAST-204ENST00000621856 BUB1BO60566 1050 aaPredicted RBP22.9■■□□□ 1.26
SPAST-204ENST00000621856 CHRNA1P02708 482 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 SSTR3P32745 418 aaPredicted RBP22.9■■□□□ 1.26
SPAST-204ENST00000621856 GLRA4Q5JXX5 417 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 RSRC2Q7L4I2 434 aaKnown RBP22.9■■□□□ 1.26
SPAST-204ENST00000621856 SLFN11Q7Z7L1 901 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 COG1Q8WTW3 980 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 CPA5Q8WXQ8 436 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 CYFIP2Q96F07 1278 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 ZMAT2Q96NC0 199 aaKnown RBP22.9■■□□□ 1.26
SPAST-204ENST00000621856 SMYD3Q9H7B4 428 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 SAGE1Q9NXZ1 904 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 KLK14Q9P0G3 267 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 GTF3C4Q9UKN8 822 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 COG5Q9UP83 839 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 IPPQ9Y573 584 aa22.9■■□□□ 1.26
SPAST-204ENST00000621856 CYP1A1P04798 512 aaPredicted RBP22.89■■□□□ 1.26
SPAST-204ENST00000621856 GRK4P32298 578 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 NSFP46459 744 aaKnown RBP22.89■■□□□ 1.26
SPAST-204ENST00000621856 HADHBP55084 474 aaKnown RBP22.89■■□□□ 1.26
SPAST-204ENST00000621856 TNNC1P63316 161 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 MGAT3Q09327 533 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 NFX1Q12986 1120 aaKnown RBP22.89■■□□□ 1.26
SPAST-204ENST00000621856 TCEAL1Q15170 157 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 PTPROQ16827 1216 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 CCDC181Q5TID7 509 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 ZNF606Q8WXB4 792 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 MMS19Q96T76 1030 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 SDCBP2Q9H190 292 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 CYP3A43Q9HB55 503 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 ST3GAL5Q9UNP4 418 aa22.89■■□□□ 1.26
SPAST-204ENST00000621856 TLR3O15455 904 aaKnown RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 KIF4AO95239 1232 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 STAU1O95793 577 aaKnown RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 CYP1A2P05177 515 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 CFHP08603 1231 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 BRD2P25440 801 aaKnown RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 CDH8P55286 799 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 MYO1EQ12965 1108 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 ALKAL1Q6UXT8 129 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 ANKRD7Q92527 254 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 TRIM11Q96F44 468 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 CNOT8Q9UFF9 292 aaKnown RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 TUBGCP4Q9UGJ1 667 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 AMFRQ9UKV5 643 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 UBQLN1Q9UMX0 589 aaKnown RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 MOXD2PA6NHM9 499 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 NOMO3P69849 1222 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 CENPCQ03188 943 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 PTPN11Q06124 597 aaPredicted RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 ZBTB6Q15916 424 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 CREG2Q8IUH2 290 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 C18orf25Q96B23 403 aaPredicted RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 GLT1D1Q96MS3 346 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 NUP85Q9BW27 656 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 RNF39Q9H2S5 420 aa22.88■■□□□ 1.25
SPAST-204ENST00000621856 CHORDC1Q9UHD1 332 aaPredicted RBP22.88■■□□□ 1.25
SPAST-204ENST00000621856 XPOTO43592 962 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms