RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SLC39A10Q9ULF5 831 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 PIPSLA2A3N6 862 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 HS6ST1O60243 411 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 RAPGEF1Q13905 1077 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CWF19L2Q2TBE0 894 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 IQSEC1Q6DN90 963 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 NXPE2Q96DL1 559 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 NT5C1BQ96P26 610 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 P4HA2O15460 535 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 H2AFYO75367 372 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 VPS26AO75436 327 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CSH1P0DML2 217 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CSH2P0DML3 217 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 EEF1GP26641 437 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 TRIP4Q15650 581 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 MGARPQ8TDB4 240 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 U2AF1L4Q8WU68 220 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 TCEANC2Q96MN5 208 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 POLE4Q9NR33 117 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SEPT4O43236 478 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SORBS3O60504 671 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 AMD1P17707 334 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ADCY1Q08828 1119 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ZNF544Q6NX49 715 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CHD1LQ86WJ1 897 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 RAB43Q86YS6 212 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 KCNN2Q9H2S1 579 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 MIS18AQ9NYP9 233 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 DYNC1I1O14576 645 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 TRIM16O95361 564 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ALDOAP04075 364 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 MCM7P33993 719 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 TXKP42681 527 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 NSFP46459 744 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 PSEN1P49768 467 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SP2Q02086 613 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 PKDCCQ504Y2 493 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 GKN2Q86XP6 184 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 BLIDQ8IZY5 108 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SMG7Q92540 1137 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 CAPN14A8MX76 684 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 KHNYNO15037 678 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 NPTX2P47972 431 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 TWF1Q12792 350 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.54□□□□□ -1.84
LPP-220ENST00000617246 TMCO4Q5TGY1 634 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ANO1Q5XXA6 986 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 RNF43Q68DV7 783 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 MAB21L3Q8N8X9 362 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 HDAC7Q8WUI4 952 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 FOXJ1Q92949 421 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SDCCAG3Q96C92 435 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 PPANQ9NQ55 473 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 NRXN3Q9Y4C0 1643 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SCGB2A1O75556 95 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CCNDBP1O95273 360 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 POLR2LP62875 67 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 RALGDSQ12967 914 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 RBBP5Q15291 538 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 UGT3A1Q6NUS8 523 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 AGMOQ6ZNB7 445 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CCDC185Q8N715 623 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SPATA9Q9BWV2 254 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 EPS8L2Q9H6S3 715 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 COQ3Q9NZJ6 369 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ANAPC2Q9UJX6 822 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 NDUFB9Q9Y6M9 179 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ENO2P09104 434 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 GLUD2P49448 558 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 UBE3CQ15386 1083 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 KSR1Q8IVT5 923 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CALR3Q96L12 384 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 ANO10Q9NW15 660 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 C19orf25Q9UFG5 118 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 MRPS33Q9Y291 106 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 H0YHG0 523 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 COBLO75128 1261 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 HSPA4P34932 840 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ARHGAP25P42331 645 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 CCL23P55773 120 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 FOXD4L6Q3SYB3 417 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 ZCCHC8Q6NZY4 707 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 FOXD4L3Q6VB84 417 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 NGRNQ9NPE2 291 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 BZW2Q9Y6E2 419 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 BCL9O00512 1426 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 LTFP02788 710 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 DSG3P32926 999 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ZC2HC1CQ53FD0 456 aaPredicted RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 MANEAQ5SRI9 462 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 RWDD4Q6NW29 188 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 CATSPER3Q86XQ3 398 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 SYCE1Q8N0S2 351 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 ZDHHC15Q96MV8 337 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 RSAD1Q9HA92 442 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 LNPEPQ9UIQ6 1025 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 USP16Q9Y5T5 823 aa3.54□□□□□ -1.84
LPP-220ENST00000617246 NVLO15381 856 aaKnown RBP3.54□□□□□ -1.84
LPP-220ENST00000617246 DARSP14868 501 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms