RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TNNC2P02585 160 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 ADSSP30520 456 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 ROR1Q01973 937 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 KCNA1Q09470 495 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 CUL4BQ13620 913 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 PTPN21Q16825 1174 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 C9orf57Q5W0N0 161 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 OVOS1Q6IE37 1185 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 UBALD2Q8IYN6 164 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 PAGE5Q96GU1 130 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 CYP4F11Q9HBI6 524 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 SORCS3Q9UPU3 1222 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 HCN4Q9Y3Q4 1203 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 TCHHQ07283 1943 aa13.33□□□□□ -0.28
CBWD3-208ENST00000612050 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 PRR33A8MZF0 331 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 C2CD4DB7Z1M9 353 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 KRT19P08727 400 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 TYMPP19971 482 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 LILRA4P59901 499 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 PLD1Q13393 1074 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 IQCEQ6IPM2 695 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
CBWD3-208ENST00000612050 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 EDAQ92838 391 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 CBWD1Q9BRT8 395 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 HSPBP1Q9NZL4 362 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 FBXL5Q9UKA1 691 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 ITGA11Q9UKX5 1188 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 C2orf16Q68DN1 1984 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 ANK1P16157 1881 aa13.32□□□□□ -0.28
CBWD3-208ENST00000612050 CCL16O15467 120 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 ACTN4O43707 911 aaKnown RBP13.31□□□□□ -0.28
CBWD3-208ENST00000612050 CLSTN1O94985 981 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 POU2F2P09086 479 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 ATF2P15336 505 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 FSHRP23945 695 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 ANP32AP39687 249 aaKnown RBP13.31□□□□□ -0.28
CBWD3-208ENST00000612050 KNOP1Q1ED39 458 aaKnown RBP13.31□□□□□ -0.28
CBWD3-208ENST00000612050 CD300LGQ6UXG3 332 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 CRELD2Q6UXH1 353 aaPredicted RBP13.31□□□□□ -0.28
CBWD3-208ENST00000612050 XXYLT1Q8NBI6 393 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 HPS3Q969F9 1004 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 NXPE3Q969Y0 559 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 SENP8Q96LD8 212 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 MFSD14AQ96MC6 490 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 IGSF9Q9P2J2 1179 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 AFF4Q9UHB7 1163 aaKnown RBP13.31□□□□□ -0.28
CBWD3-208ENST00000612050 DENND4AQ7Z401 1863 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 CUL9Q8IWT3 2517 aa13.31□□□□□ -0.28
CBWD3-208ENST00000612050 ANO9A1A5B4 782 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 KPNA7A9QM74 516 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 PIRO00625 290 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 CYB561D2O14569 222 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 MEFVO15553 781 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 EXOC3O60645 756 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 HUS1O60921 280 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 OAZ2O95190 189 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ITGB3P05106 788 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 TNNI1P19237 187 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 CYP2J2P51589 502 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 GUCY2FP51841 1108 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 NDUFA8P51970 172 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 RBP5P82980 135 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ZXDAP98168 799 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ADCY1Q08828 1119 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 MRPL58Q14197 206 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 MYBPC2Q14324 1141 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 DUOXA2Q1HG44 320 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 POTEHQ6S545 545 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 EPM2AIP1Q7L775 607 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 GRASPQ7Z6J2 395 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 SUGP1Q8IWZ8 645 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 CSGALNACT2Q8N6G5 542 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 LRRC52Q8N7C0 313 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ZNF512Q96ME7 567 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 AGPAT3Q9NRZ7 376 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 RMND1Q9NWS8 449 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 CDH22Q9UJ99 828 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 AGAP1Q9UPQ3 857 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 HPSEQ9Y251 543 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 NCOR1O75376 2440 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 FAM86C2PA6NEL3 165 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ZNF197O14709 1029 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ADAM12O43184 909 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 CALUO43852 315 aaPredicted RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ABLIM3O94929 683 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 ZNF202O95125 648 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 RPN1P04843 607 aaKnown RBP13.3□□□□□ -0.28
CBWD3-208ENST00000612050 PTPN2P17706 415 aa13.3□□□□□ -0.28
CBWD3-208ENST00000612050 CASP1P29466 404 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms