RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 RAP1GAPP47736 663 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 CDH8P55286 799 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 GCNT1Q02742 428 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 ARID5AQ03989 594 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 CUL2Q13617 745 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 ZNF699Q32M78 642 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 ZNF280BQ86YH2 543 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 HACE1Q8IYU2 909 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 C3orf58Q8NDZ4 430 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 BADQ92934 168 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 CASD1Q96PB1 797 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 BAG1Q99933 345 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-221ENST00000608903 ELAC1Q9H777 363 aaKnown RBP12.41□□□□□ -0.42
CTCFL-221ENST00000608903 VRTNQ9H8Y1 702 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 NXF1Q9UBU9 619 aaKnown RBP12.41□□□□□ -0.42
CTCFL-221ENST00000608903 NME7Q9Y5B8 376 aa12.41□□□□□ -0.42
CTCFL-221ENST00000608903 PTPRSQ13332 1948 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 F8W810 466 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 TPM1P09493 284 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 WEE2P0C1S8 567 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 SYN1P17600 705 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 KCNJ6P48051 423 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 SFMBT2Q5VUG0 894 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 SCARA5Q6ZMJ2 495 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-221ENST00000608903 PPP1R13BQ96KQ4 1090 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 TSPAN18Q96SJ8 248 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 SMYD3Q9H7B4 428 aa12.4□□□□□ -0.42
CTCFL-221ENST00000608903 CASTOR2A6NHX0 329 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 RIOK3O14730 519 aaKnown RBP12.4□□□□□ -0.43
CTCFL-221ENST00000608903 EVI5O60447 810 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 STAU1O95793 577 aaKnown RBP12.4□□□□□ -0.43
CTCFL-221ENST00000608903 CLCNKBP51801 687 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 DEFB103AP81534 67 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 WDR72Q3MJ13 1102 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 SYN2Q92777 582 aaPredicted RBP12.4□□□□□ -0.43
CTCFL-221ENST00000608903 SPAG5Q96R06 1193 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 RPS6KC1Q96S38 1066 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 SYT11Q9BT88 431 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 BCO2Q9BYV7 579 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 NIF3L1Q9GZT8 377 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 MYO6Q9UM54 1294 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 PCDHB7Q9Y5E2 793 aa12.4□□□□□ -0.43
CTCFL-221ENST00000608903 FNDC1Q4ZHG4 1894 aaPredicted RBP12.4□□□□□ -0.43
CTCFL-221ENST00000608903 CYP26A1O43174 497 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 CTIFO43310 598 aaKnown RBP12.39□□□□□ -0.43
CTCFL-221ENST00000608903 ATICP31939 592 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 STAT1P42224 750 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 MFAP3P55082 362 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 IKBKEQ14164 716 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 ASTE1Q2TB18 679 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-221ENST00000608903 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF571Q7Z3V5 609 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-221ENST00000608903 TMEM199Q8N511 208 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 TAF4BQ92750 862 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 IL23AQ9NPF7 189 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 UBN1Q9NPG3 1134 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 TBC1D13Q9NVG8 400 aa12.39□□□□□ -0.43
CTCFL-221ENST00000608903 A0A0U1RQJ8 604 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ITGB1P05556 798 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 RFX1P22670 979 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 EIF4A3P38919 411 aaKnown RBP12.38□□□□□ -0.43
CTCFL-221ENST00000608903 CDK17Q00537 523 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 DSC1Q08554 894 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 GRIK3Q13003 919 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ASIC2Q16515 512 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 UPP1Q16831 310 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF667Q5HYK9 610 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 GLB1LQ6UWU2 654 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 CCDC112Q8NEF3 446 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ATRIPQ8WXE1 791 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ANKRD7Q92527 254 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 HAUS4Q9H6D7 363 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 DNAJB4Q9UDY4 337 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 HMGXB4Q9UGU5 601 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ZMYND8Q9ULU4 1186 aaPredicted RBP12.38□□□□□ -0.43
CTCFL-221ENST00000608903 CNTN6Q9UQ52 1028 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 CCDC85CA6NKD9 419 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF263O14978 683 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 HCRTO43612 131 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 UPP2O95045 317 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 CHRNB2P17787 502 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 USP8P40818 1118 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 PRKCIP41743 596 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 LILRA4P59901 499 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 WDR5P61964 334 aaKnown RBP12.38□□□□□ -0.43
CTCFL-221ENST00000608903 PTK2Q05397 1052 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 PTPN14Q15678 1187 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 ZNF365Q70YC5 407 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 OTOP2Q7RTS6 562 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 NPAS4Q8IUM7 802 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
CTCFL-221ENST00000608903 SLC20A1Q8WUM9 679 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms