RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
LINC00963-212ENST00000608669 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
LINC00963-212ENST00000608669 MRPL43Q8N983 215 aaKnown RBP13.16□□□□□ -0.3
LINC00963-212ENST00000608669 TRIML1Q8N9V2 468 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 LNX1Q8TBB1 728 aaPredicted RBP13.16□□□□□ -0.3
LINC00963-212ENST00000608669 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 SENP8Q96LD8 212 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 KLHL5Q96PQ7 755 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 TTPALQ9BTX7 342 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
LINC00963-212ENST00000608669 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 KIAA1586Q9HCI6 787 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 DERAQ9Y315 318 aa13.16□□□□□ -0.3
LINC00963-212ENST00000608669 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 LILRB3O75022 631 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 KRT13P13646 458 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 FGFR3P22607 806 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 ACAT1P24752 427 aaKnown RBP13.15□□□□□ -0.3
LINC00963-212ENST00000608669 RPL13P26373 211 aaKnown RBP13.15□□□□□ -0.3
LINC00963-212ENST00000608669 KLRC2P26717 231 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 TAF6P49848 677 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 LRRC63Q05C16 580 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 ORC1Q13415 861 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 NFIL3Q16649 462 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 DUOXA2Q1HG44 320 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 WSCD1Q658N2 575 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
LINC00963-212ENST00000608669 OSTM1Q86WC4 334 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 ZC3H3Q8IXZ2 948 aaKnown RBP13.15□□□□□ -0.3
LINC00963-212ENST00000608669 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 PGLYRP2Q96PD5 576 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
LINC00963-212ENST00000608669 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 CDY1Q9Y6F8 540 aa13.15□□□□□ -0.3
LINC00963-212ENST00000608669 CYB561D2O14569 222 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 HLA-DRAP01903 254 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 C4BPAP04003 597 aaKnown RBP13.14□□□□□ -0.31
LINC00963-212ENST00000608669 POU3F3P20264 500 aaPredicted RBP13.14□□□□□ -0.31
LINC00963-212ENST00000608669 OR1D2P34982 312 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 LTBRP36941 435 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 NDUFV1P49821 464 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 KCNQ1P51787 676 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
LINC00963-212ENST00000608669 TYRO3Q06418 890 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 CTXN3Q4LDR2 81 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 CBWD6Q4V339 395 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 CBWD3Q5JTY5 395 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 CBWD5Q5RIA9 395 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 SASS6Q6UVJ0 657 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 SV2AQ7L0J3 742 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 STKLD1Q8NE28 680 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 OR10T2Q8NGX3 314 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 TAS1R2Q8TE23 839 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
LINC00963-212ENST00000608669 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 CLSTN3Q9BQT9 956 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 SMYD3Q9H7B4 428 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 NGRNQ9NPE2 291 aaKnown RBP13.14□□□□□ -0.31
LINC00963-212ENST00000608669 RWDD2AQ9UIY3 292 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 ITGA11Q9UKX5 1188 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
LINC00963-212ENST00000608669 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
LINC00963-212ENST00000608669 BRWD1Q9NSI6 2320 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 C2orf16Q68DN1 1984 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 BICDL2A1A5D9 508 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 KPNA7A9QM74 516 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-212ENST00000608669 AARSP49588 968 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00963-212ENST00000608669 CDH8P55286 799 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 RBP5P82980 135 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 LRMPQ12912 555 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 TRPC3Q13507 836 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 NCOA4Q13772 614 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 SURF1Q15526 300 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 STX1AQ16623 288 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 TPD52L1Q16890 204 aaPredicted RBP13.13□□□□□ -0.31
LINC00963-212ENST00000608669 KLHL40Q2TBA0 621 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 ZNF699Q32M78 642 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 SV2CQ496J9 727 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 ANO6Q4KMQ2 910 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 INTS8Q75QN2 995 aaKnown RBP13.13□□□□□ -0.31
LINC00963-212ENST00000608669 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 TTC9BQ8N6N2 239 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 MLKLQ8NB16 471 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 PIK3R5Q8WYR1 880 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
LINC00963-212ENST00000608669 ZNF560Q96MR9 790 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 MMS19Q96T76 1030 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 MRPL45Q9BRJ2 306 aaKnown RBP13.13□□□□□ -0.31
LINC00963-212ENST00000608669 SDCBP2Q9H190 292 aa13.13□□□□□ -0.31
LINC00963-212ENST00000608669 UBE2ZQ9H832 354 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms