RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 FAM26FQ5R3K3 315 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 ZBTB41Q5SVQ8 909 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 DCLRE1AQ6PJP8 1040 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 TMEM184AQ6ZMB5 413 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 UNC13DQ70J99 1090 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 CEP57Q86XR8 500 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 RNF168Q8IYW5 571 aaPredicted RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 FSIP1Q8NA03 581 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 VN1R2Q8NFZ6 395 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 RIN2Q8WYP3 895 aaPredicted RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 HPS3Q969F9 1004 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 C18orf25Q96B23 403 aaPredicted RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 B3GALT6Q96L58 329 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 ZMAT2Q96NC0 199 aaKnown RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 UHRF1Q96T88 793 aaPredicted RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 BLZF1Q9H2G9 400 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 GOLGA2P5Q9HBQ8 144 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.61
SDF2-208ENST00000589788 HCFC2Q9Y5Z7 792 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 STYXL1Q9Y6J8 313 aa11.27□□□□□ -0.61
SDF2-208ENST00000589788 PRUNE2Q8WUY3 3088 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 PVALEFA0A1B0GWK0 134 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 TTC26A0AVF1 554 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 LACTBL1A8MY62 500 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 PODXLO00592 558 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 ZBTB24O43167 697 aaPredicted RBP11.26□□□□□ -0.61
SDF2-208ENST00000589788 LZTS3O60299 673 aaPredicted RBP11.26□□□□□ -0.61
SDF2-208ENST00000589788 FAM189A1O60320 539 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
SDF2-208ENST00000589788 EFEMP2O95967 443 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 IL9P15248 144 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 HOXB8P17481 243 aaPredicted RBP11.26□□□□□ -0.61
SDF2-208ENST00000589788 CASP1P29466 404 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 RPIAP49247 311 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 ACOT2P49753 483 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 NDUFA8P51970 172 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 WNT7BP56706 349 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 CREMQ03060 361 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 SPAG1Q07617 926 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 PDE4CQ08493 712 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 CUL4BQ13620 913 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 KCNC3Q14003 757 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 ENOX2Q16206 610 aaKnown RBP11.26□□□□□ -0.61
SDF2-208ENST00000589788 TMEM164Q5U3C3 297 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 KIAA0319Q5VV43 1072 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 ANKRD54Q6NXT1 300 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 ELMSAN1Q6PJG2 1045 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 CD302Q8IX05 232 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 GRAMD1CQ8IYS0 662 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 PAGE5Q96GU1 130 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 MSLNLQ96KJ4 702 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 KLHL5Q96PQ7 755 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 TSPAN18Q96SJ8 248 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 TTPALQ9BTX7 342 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 FGFBP2Q9BYJ0 223 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 IKZF4Q9H2S9 585 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
SDF2-208ENST00000589788 CHST7Q9NS84 486 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 CPSF3Q9UKF6 684 aaKnown RBP11.26□□□□□ -0.61
SDF2-208ENST00000589788 NOVA2Q9UNW9 492 aaKnown RBP11.26□□□□□ -0.61
SDF2-208ENST00000589788 DOLKQ9UPQ8 538 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 HPSEQ9Y251 543 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 EYSQ5T1H1 3165 aa11.26□□□□□ -0.61
SDF2-208ENST00000589788 REV3LO60673 3130 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 EIF3DO15371 548 aaKnown RBP eCLIP11.25□□□□□ -0.61
SDF2-208ENST00000589788 TEX28O15482 410 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 MEFVO15553 781 aaPredicted RBP11.25□□□□□ -0.61
SDF2-208ENST00000589788 MBTPS2O43462 519 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 EPCAMP16422 314 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 GARTP22102 1010 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 ARMCX5Q6P1M9 558 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 PDXDC1Q6P996 788 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.25□□□□□ -0.61
SDF2-208ENST00000589788 GPR65Q8IYL9 337 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 SMRP1Q8NCR6 262 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 NOC3LQ8WTT2 800 aaKnown RBP11.25□□□□□ -0.61
SDF2-208ENST00000589788 SLC22A17Q8WUG5 538 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 CCDC34Q96HJ3 373 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 NECAB3Q96P71 396 aaPredicted RBP11.25□□□□□ -0.61
SDF2-208ENST00000589788 APOL5Q9BWW9 433 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 EXOC1Q9NV70 894 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 DZANK1Q9NVP4 752 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 TUBGCP4Q9UGJ1 667 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 UBQLN1Q9UMX0 589 aaKnown RBP11.25□□□□□ -0.61
SDF2-208ENST00000589788 NUB1Q9Y5A7 615 aa11.25□□□□□ -0.61
SDF2-208ENST00000589788 FAM237AA0A1B0GTK4 181 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 KIAA0391O15091 583 aaKnown RBP11.24□□□□□ -0.61
SDF2-208ENST00000589788 IL18RAPO95256 599 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 LDHAP00338 332 aaKnown RBP11.24□□□□□ -0.61
SDF2-208ENST00000589788 GLUD1P00367 558 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 MYL1P05976 194 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 CYP3A5P20815 502 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 ADSSP30520 456 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 MCM4P33991 863 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 CLDN10P78369 228 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 POU5F1Q01860 360 aaKnown RBP11.24□□□□□ -0.61
SDF2-208ENST00000589788 SMAD2Q15796 467 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms