RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 APPL2Q8NEU8 664 aa23.86■■□□□ 1.41
CAPNS1-205ENST00000588780 ZSWIM6Q9HCJ5 1215 aa23.86■■□□□ 1.41
CAPNS1-205ENST00000588780 SLC8A2Q9UPR5 921 aa23.86■■□□□ 1.41
CAPNS1-205ENST00000588780 EXTL3O43909 919 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 REC8O95072 547 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 MPLP40238 635 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 NOVA1P51513 510 aaKnown RBP23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 EPHA5P54756 1037 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 FCHO2Q0JRZ9 810 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 FOXC1Q12948 553 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 ARHGAP29Q52LW3 1261 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 WDR44Q5JSH3 913 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 RNF19BQ6ZMZ0 732 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 ARID3BQ8IVW6 561 aaPredicted RBP23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 SYNPOQ8N3V7 929 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 CEP120Q8N960 986 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 POLD4Q9HCU8 107 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 TUFT1Q9NNX1 390 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 MAFFQ9ULX9 164 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 YIPF1Q9Y548 306 aa23.85■■□□□ 1.41
CAPNS1-205ENST00000588780 K7ERI5 159 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 SPATA31C1P0DKV0 1188 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 CYP11B2P19099 503 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 EPHB3P54753 998 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 PLD1Q13393 1074 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 MRPL58Q14197 206 aaKnown RBP23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 ACAP1Q15027 740 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 ZNF568Q3ZCX4 644 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 CATSPER3Q86XQ3 398 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 WASF1Q92558 559 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 PGLYRP2Q96PD5 576 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 TCHPQ9BT92 498 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 VPS45Q9NRW7 570 aa23.84■■□□□ 1.41
CAPNS1-205ENST00000588780 SPAG17Q6Q759 2223 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 HOXB3P14651 431 aaPredicted RBP23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 RPL9P32969 192 aaKnown RBP23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 GRM5P41594 1212 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 RAP1GAPP47736 663 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 SCRN1Q12765 414 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 STXBP5Q5T5C0 1151 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 DDX12PQ92771 950 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 SUSD3Q96L08 255 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 PDRG1Q9NUG6 133 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 ORC3Q9UBD5 711 aaPredicted RBP23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 DAXXQ9UER7 740 aaPredicted RBP23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 PCDHGA5Q9Y5G8 931 aa23.83■■□□□ 1.41
CAPNS1-205ENST00000588780 STK36Q9NRP7 1315 aa23.83■■□□□ 1.4
CAPNS1-205ENST00000588780 MED24O75448 989 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 ALDH1A3P47895 512 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 CCINQ13939 588 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 TCEAL6Q6IPX3 200 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 TCEAL3Q969E4 200 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 C18orf25Q96B23 403 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 ZMAT2Q96NC0 199 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 TBC1D32Q96NH3 1257 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 ACAP3Q96P50 834 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 CDT1Q9H211 546 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 ATXN3LQ9H3M9 355 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 TNFSF13BQ9Y275 285 aa23.82■■□□□ 1.4
CAPNS1-205ENST00000588780 CCDC169A6NNP5 214 aa23.81■■□□□ 1.4
CAPNS1-205ENST00000588780 HARSP12081 509 aaKnown RBP23.81■■□□□ 1.4
CAPNS1-205ENST00000588780 TNK2Q07912 1038 aa23.81■■□□□ 1.4
CAPNS1-205ENST00000588780 ARHGAP15Q53QZ3 475 aa23.81■■□□□ 1.4
CAPNS1-205ENST00000588780 GPR158Q5T848 1215 aa23.81■■□□□ 1.4
CAPNS1-205ENST00000588780 ERMNQ8TAM6 284 aa23.81■■□□□ 1.4
CAPNS1-205ENST00000588780 EDEM2Q9BV94 578 aa23.81■■□□□ 1.4
CAPNS1-205ENST00000588780 ATG13O75143 517 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 ZNF252P-AS1Q0IIN9 211 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 PTPAQ15257 358 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 PLA2G2CQ5R387 149 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 ALKAL1Q6UXT8 129 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 MTMR9Q96QG7 549 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 TMEM209Q96SK2 561 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 THG1LQ9NWX6 298 aaKnown RBP23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 PCDHB8Q9UN66 801 aa23.8■■□□□ 1.4
CAPNS1-205ENST00000588780 C4orf47A7E2U8 309 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 OR4Q2P0C623 313 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 SPINK2P20155 84 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 FOSBP53539 338 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 PLCB2Q00722 1185 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 CREB5Q02930 508 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 YWHAHQ04917 246 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 GRSF1Q12849 480 aaKnown RBP eCLIP23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 DUSP4Q13115 394 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 ELF2Q15723 593 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 ITPRIPL2Q3MIP1 535 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 XKR4Q5GH76 650 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 DAB2IPQ5VWQ8 1189 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 PKN3Q6P5Z2 889 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 USP37Q86T82 979 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 BPIFB1Q8TDL5 484 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 KIFAP3Q92845 792 aa23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 TIMM13Q9Y5L4 95 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-205ENST00000588780 FRYQ5TBA9 3013 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 CCDC163A0A0D9SF12 145 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 GIPC1O14908 333 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 KCNE1P15382 129 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 MCM7P33993 719 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 TMC8Q8IU68 726 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 LRRC3BQ96PB8 259 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms