RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PPM1AP35813 382 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 LRMPQ12912 555 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 FAM109BQ6ICB4 259 aaPredicted RBP19.66■□□□□ 0.74
RFFL-211ENST00000584541 HASPINQ8TF76 798 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 CLP1Q92989 425 aaKnown RBP19.66■□□□□ 0.74
RFFL-211ENST00000584541 FAXDC2Q96IV6 333 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 NIF3L1Q9GZT8 377 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 PLCB1Q9NQ66 1216 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 NXF1Q9UBU9 619 aaKnown RBP19.66■□□□□ 0.74
RFFL-211ENST00000584541 APEX2Q9UBZ4 518 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 ADAM28Q9UKQ2 775 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 DAAM1Q9Y4D1 1078 aa19.66■□□□□ 0.74
RFFL-211ENST00000584541 LCHNA4D1U4 455 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 NT5C1B-RDH14C9J2C7 533 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 ADCY5O95622 1261 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 TRIM21P19474 475 aaKnown RBP19.65■□□□□ 0.74
RFFL-211ENST00000584541 RFX1P22670 979 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 TBXAS1P24557 533 aaPredicted RBP19.65■□□□□ 0.74
RFFL-211ENST00000584541 ELAVL2Q12926 359 aaKnown RBP19.65■□□□□ 0.74
RFFL-211ENST00000584541 PRPF38BQ5VTL8 546 aaKnown RBP19.65■□□□□ 0.74
RFFL-211ENST00000584541 SCARA3Q6AZY7 606 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 SPOPLQ6IQ16 392 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 PPM1KQ8N3J5 372 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 C3orf58Q8NDZ4 430 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 TMEM169Q96HH4 297 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 MMS19Q96T76 1030 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 NUP58Q9BVL2 599 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 FAM207AQ9NSI2 230 aaPredicted RBP19.65■□□□□ 0.74
RFFL-211ENST00000584541 GDAP2Q9NXN4 497 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 SPG21Q9NZD8 308 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 SNX9Q9Y5X1 595 aa19.65■□□□□ 0.74
RFFL-211ENST00000584541 A0A1W2PPC1 479 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 LINC01553A4QN01 128 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 HUS1O60921 280 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 LRRN2O75325 713 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 CA3P07451 260 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 PBX1P40424 430 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 PBX3P40426 434 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 KLK7P49862 253 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 MFAP3P55082 362 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 KLHDC7AQ5VTJ3 777 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 SPECC1LQ69YQ0 1117 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 ENOSF1Q7L5Y1 443 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 SLC39A11Q8N1S5 342 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 TATDN2Q93075 761 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 IQCDQ96DY2 449 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 SAMD11Q96NU1 681 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 PRO3102Q9H379 93 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.64■□□□□ 0.73
RFFL-211ENST00000584541 SF3B1O75533 1304 aaKnown RBP eCLIP19.64■□□□□ 0.735e-6■■■■■ 88.1
RFFL-211ENST00000584541 ITIH6Q6UXX5 1313 aa19.64■□□□□ 0.73
RFFL-211ENST00000584541 CYB561D2O14569 222 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 SPTLC1O15269 473 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 ODC1P11926 461 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 MYOGP15173 224 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 CTNNB1P35222 781 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 BRCC3P46736 316 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 AARSP49588 968 aaKnown RBP eCLIP19.63■□□□□ 0.73
RFFL-211ENST00000584541 YWHAEP62258 255 aaKnown RBP19.63■□□□□ 0.73
RFFL-211ENST00000584541 GCNT1Q02742 428 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 PTPN21Q16825 1174 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 TIGD5Q53EQ6 642 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 PHLDB3Q6NSJ2 640 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 DPH6Q7L8W6 267 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 VSTM4Q8IW00 320 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 APPL2Q8NEU8 664 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 ELMO3Q96BJ8 720 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 IGSF21Q96ID5 467 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 SUSD3Q96L08 255 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 SENP8Q96LD8 212 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 PLVAPQ9BX97 442 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 PBX4Q9BYU1 374 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 CYP3A43Q9HB55 503 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 APOBEC3GQ9HC16 384 aaKnown RBP19.63■□□□□ 0.73
RFFL-211ENST00000584541 SIX2Q9NPC8 291 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 UBE2TQ9NPD8 197 aaPredicted RBP19.63■□□□□ 0.73
RFFL-211ENST00000584541 MARCH5Q9NX47 278 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 STK39Q9UEW8 545 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 DSEQ9UL01 958 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 POLIQ9UNA4 740 aa19.63■□□□□ 0.73
RFFL-211ENST00000584541 F8W810 466 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 ITGB1P05556 798 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 TPM1P09493 284 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 UCHL3P15374 230 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 BMPR1AP36894 532 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 KRT17Q04695 432 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 CUL2Q13617 745 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 TRIM14Q14142 442 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 FUT10Q6P4F1 479 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 CD300LGQ6UXG3 332 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 SCARA5Q6ZMJ2 495 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 RRAGAQ7L523 313 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 CACNA2D4Q7Z3S7 1137 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.62■□□□□ 0.73
RFFL-211ENST00000584541 METTL23Q86XA0 190 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 ARHGEF19Q8IW93 802 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 TOP6BLQ8N6T0 577 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 FBXL5Q9UKA1 691 aa19.62■□□□□ 0.73
RFFL-211ENST00000584541 DNAJC12Q9UKB3 198 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms