RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 PON2Q15165 354 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 ZNF568Q3ZCX4 644 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 STPG1Q5TH74 334 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 TXNDC11Q6PKC3 985 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 RNF19BQ6ZMZ0 732 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 CACNA2D4Q7Z3S7 1137 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 RALGPS2Q86X27 583 aaPredicted RBP13.46□□□□□ -0.25
TOP3A-215ENST00000583328 DDX12PQ92771 950 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 LOXL4Q96JB6 756 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 SUSD3Q96L08 255 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 ACAP3Q96P50 834 aa13.46□□□□□ -0.25
TOP3A-215ENST00000583328 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.25
TOP3A-215ENST00000583328 SDK1Q7Z5N4 2213 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 CTDNEP1O95476 244 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 KCNE1P15382 129 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 RPA1P27694 616 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 HOXC13P31276 330 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 CTHP32929 405 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 MCM7P33993 719 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 EPHB3P54753 998 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 FCHO2Q0JRZ9 810 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 HAUS6Q7Z4H7 955 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 ARID3BQ8IVW6 561 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-215ENST00000583328 SYNPOQ8N3V7 929 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 KIFAP3Q92845 792 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 C18orf25Q96B23 403 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-215ENST00000583328 TBC1D32Q96NH3 1257 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 ACO2Q99798 780 aaKnown RBP13.45□□□□□ -0.26
TOP3A-215ENST00000583328 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 CDT1Q9H211 546 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 RXFP3Q9NSD7 469 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 GTSE1Q9NYZ3 720 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 TPCN1Q9ULQ1 816 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 YIPF1Q9Y548 306 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 USP24Q9UPU5 2620 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 ZFHX4Q86UP3 3567 aa13.45□□□□□ -0.26
TOP3A-215ENST00000583328 CCDC169A6NNP5 214 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 RPP40O75818 363 aaKnown RBP13.44□□□□□ -0.26
TOP3A-215ENST00000583328 EPN2O95208 641 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 KCNK5O95279 499 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 PROS1P07225 676 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 ALDH1A3P47895 512 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 PXNP49023 591 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-215ENST00000583328 FOSBP53539 338 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 PLD1Q13393 1074 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 ARHGAP29Q52LW3 1261 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 DIS3L2Q8IYB7 885 aaKnown RBP13.44□□□□□ -0.26
TOP3A-215ENST00000583328 GAB3Q8WWW8 586 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 ZFYVE19Q96K21 471 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 TARS2Q9BW92 718 aaKnown RBP13.44□□□□□ -0.26
TOP3A-215ENST00000583328 MRPL4Q9BYD3 311 aaKnown RBP13.44□□□□□ -0.26
TOP3A-215ENST00000583328 SH2B1Q9NRF2 756 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-215ENST00000583328 CNTN3Q9P232 1028 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
TOP3A-215ENST00000583328 EXTL3O43909 919 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 MCF2P10911 925 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 HARSP12081 509 aaKnown RBP13.43□□□□□ -0.26
TOP3A-215ENST00000583328 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
TOP3A-215ENST00000583328 PEX3P56589 373 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 YWHAHQ04917 246 aaPredicted RBP13.43□□□□□ -0.26
TOP3A-215ENST00000583328 DUSP4Q13115 394 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 CCINQ13939 588 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 TRIM29Q14134 588 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 STXBP5Q5T5C0 1151 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 KBTBD6Q86V97 674 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 TMC8Q8IU68 726 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 LRRC3BQ96PB8 259 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 PGLYRP2Q96PD5 576 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
TOP3A-215ENST00000583328 LRRC3Q9BY71 257 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 BHMT2Q9H2M3 363 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 ATXN3LQ9H3M9 355 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 TMEM134Q9H6X4 195 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 PTPRHQ9HD43 1115 aa13.43□□□□□ -0.26
TOP3A-215ENST00000583328 CHD6Q8TD26 2715 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 OR4Q2P0C623 313 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 CCT6AP40227 531 aaKnown RBP13.42□□□□□ -0.26
TOP3A-215ENST00000583328 RAP1GAPP47736 663 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 ARHGAP15Q53QZ3 475 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 GPR158Q5T848 1215 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 HAUS3Q68CZ6 603 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 RNF43Q68DV7 783 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 USP37Q86T82 979 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 TMEM209Q96SK2 561 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 OXCT2Q9BYC2 517 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-215ENST00000583328 DNAJC25Q9H1X3 360 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 SMOC1Q9H4F8 434 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 OBP2AQ9NY56 170 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 SLC8A2Q9UPR5 921 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 SLC27A5Q9Y2P5 690 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 PCDHGA5Q9Y5G8 931 aa13.42□□□□□ -0.26
TOP3A-215ENST00000583328 TIMM13Q9Y5L4 95 aaPredicted RBP13.42□□□□□ -0.26
TOP3A-215ENST00000583328 PHLPP2Q6ZVD8 1323 aa13.41□□□□□ -0.26
TOP3A-215ENST00000583328 CFAP47Q6ZTR5 3102 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms